RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 GNRHR2Q96P88 292 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 HDHD3Q9BSH5 251 aaPredicted RBP11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 SEMA5BQ9P283 1151 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 FBXO7Q9Y3I1 522 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 A6NIZ1 184 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 UMAD1C9J7I0 102 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 RER1O15258 196 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 YIF1AO95070 293 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 IFNA2P01563 188 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 GLI4P10075 376 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 ZNF121P58317 390 aaPredicted RBP11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 RAP1BP61224 184 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 RAP1AP62834 184 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 MYBPHQ13203 477 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 C9orf152Q5JTZ5 239 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 CRIP3Q6Q6R5 217 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 CD300LFQ8TDQ1 290 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 LIN37Q96GY3 246 aaPredicted RBP11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 ZNF701Q9NV72 531 aaPredicted RBP11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 KLRF1Q9NZS2 232 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 RFNGQ9Y644 331 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 POMT1Q9Y6A1 747 aa11.67□□□□□ -0.54
PDZRN3-208ENST00000479530 A0A1W2PQM1 296 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 LIPT2A6NK58 231 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 FIGNL2A6NMB9 653 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 DHRS7CA6NNS2 312 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 XRCC2O43543 280 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 OR2J2O76002 312 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 OR13C7P0DN81 318 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 EIF2S3P41091 472 aaKnown RBP11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 FAM3AP98173 230 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 C17orf67Q0P5P2 114 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 SP6Q3SY56 376 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 GGNBP1Q5YKI7 109 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 RHBDD2Q6NTF9 364 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 TMEM156Q8N614 296 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 OR56B1Q8NGI3 324 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 RHBDD1Q8TEB9 315 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 OR10A2Q9H208 303 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 LIME1Q9H400 295 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 CHST11Q9NPF2 352 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 SERINC1Q9NRX5 453 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 AP4M1O00189 453 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 DIRAS3O95661 229 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 GAPDHP04406 335 aaKnown RBP11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 CELA2AP08217 269 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 BLVRBP30043 206 aaPredicted RBP11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 RBMXP38159 391 aaKnown RBP11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 PTGDSP41222 190 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 DAP3P51398 398 aaKnown RBP11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 AFF3P51826 1226 aaKnown RBP11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 MFSD8Q8NHS3 518 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 FNDC9Q8TBE3 224 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 TMEM234Q8WY98 164 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 EMG1Q92979 244 aaKnown RBP11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 SCGB3A2Q96PL1 93 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 GGACTQ9BVM4 153 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 PAPOLGQ9BWT3 736 aaKnown RBP11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 TUBA4BQ9H853 241 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 MCTS1Q9ULC4 181 aaKnown RBP11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 MEMO1Q9Y316 297 aa11.66□□□□□ -0.54
PDZRN3-208ENST00000479530 NCOA6Q14686 2063 aaPredicted RBP11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 IFITM10A6NMD0 228 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 MSTNO14793 375 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 DANCRP0C864 163 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 SMAD4Q13485 552 aaKnown RBP11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 UBAC2Q8NBM4 344 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 ZNF2Q9BSG1 426 aaPredicted RBP11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 UBE2ZQ9H832 354 aaPredicted RBP11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 C1orf123Q9NWV4 160 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 RCL1Q9Y2P8 373 aaKnown RBP11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 POLR1DQ9Y2S0 133 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 ZNF878C9JN71 531 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 SERPINA2P20848 420 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 SFTPDP35247 375 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 PMELP40967 661 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 ASCL1P50553 236 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 STARD6P59095 220 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 CHRFAM7AQ494W8 412 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 WDR74Q6RFH5 385 aaPredicted RBP11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 C6orf201Q7Z4U5 140 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 TCTEX1D2Q8WW35 142 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 REEP6Q96HR9 211 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 SHDQ96IW2 340 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 TCEAL7Q9BRU2 100 aa11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 FAM212BQ9NTI7 297 aaPredicted RBP11.65□□□□□ -0.54
PDZRN3-208ENST00000479530 ADAMTS9Q9P2N4 1935 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 FOXI3A8MTJ6 420 aaPredicted RBP11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 MBPP02686 304 aaPredicted RBP11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 PRF1P14222 555 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 PPP1CCP36873 323 aaKnown RBP11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 CCL7P80098 99 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 ZP4Q12836 540 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 HMGN3Q15651 99 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 TSPO2Q5TGU0 170 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 OPN5Q6U736 354 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 FAM57BQ71RH2 274 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 ZNF565Q8N9K5 539 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 RARRES2Q99969 163 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 PECRQ9BY49 303 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms