RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 DAZ3Q9NR90 486 aaKnown RBP2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 FBXO6Q9NRD1 293 aaPredicted RBP2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 MMP26Q9NRE1 261 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 C20orf96Q9NUD7 363 aaPredicted RBP2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 EXD2Q9NVH0 621 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 EURLQ9NYK6 297 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 TAS2R13Q9NYV9 303 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 CALYQ9NYX4 217 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 PSMC3IPQ9P2W1 217 aaPredicted RBP2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 MTRF1LQ9UGC7 380 aaKnown RBP2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 FARSAQ9Y285 508 aaKnown RBP2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 TP53TG5Q9Y2B4 290 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 STARD10Q9Y365 291 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 MRPS18BQ9Y676 258 aaKnown RBP2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 MYO7BQ6PIF6 2116 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 RP1L1Q8IWN7 2480 aaPredicted RBP2.71□□□□□ -1.97
CDC42BPA-212ENST00000478573 PCNX1Q96RV3 2341 aa2.71□□□□□ -1.97
CDC42BPA-212ENST00000478573 SPENQ96T58 3664 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 ASH1LQ9NR48 2969 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 POLEQ07864 2286 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 MED12LQ86YW9 2145 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 IGKV1-8A0A0C4DH67 115 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 A0A0G2JLM5 398 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 GMNCA6NCL1 334 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 RBMY1BA6NDE4 496 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 RBMY1EA6NEQ0 496 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 GOLGA8MH3BSY2 632 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 CCL21O00585 134 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 SOX15O60248 233 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 WBP4O75554 376 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 WISP3O95389 354 aaPredicted RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 NSA2O95478 260 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 SERPIND1P05546 499 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 RBMY1DP0C7P1 496 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 RBMY1A1P0DJD3 496 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 CD1EP15812 388 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 ABOP16442 354 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 TCN1P20061 433 aaPredicted RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 PSMB5P28074 263 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 FMO3P31513 532 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 RBMXP38159 391 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 CTRLP40313 264 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 SLC18A1P54219 525 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 PRPS1P60891 318 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 GNGT1P63211 74 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 REEP5Q00765 189 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 PRDX1Q06830 199 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 FAM53BQ14153 422 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 TRIP13Q15645 432 aaPredicted RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 SNCBQ16143 134 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 ZNF630Q2M218 657 aaPredicted RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 DEFB109BQ30KR1 87 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 CCSMST1Q4G0I0 132 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 NKAIN1Q4KMZ8 207 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 ACSBG2Q5FVE4 666 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 XKR7Q5GH72 579 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 CDKL4Q5MAI5 379 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 DUPD1Q68J44 220 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 TRIM40Q6P9F5 258 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 IGFL2Q6UWQ7 119 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 CLEC18BQ6UXF7 455 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 CPNE9Q8IYJ1 553 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 TCAIMQ8N3R3 496 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 TBC1D19Q8N5T2 526 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 SUMF2Q8NBJ7 301 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 FBXO36Q8NEA4 188 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 TTLQ8NG68 377 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 PLPPR1Q8TBJ4 325 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 MCOLN3Q8TDD5 553 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 GPR151Q8TDV0 419 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 SKA2Q8WVK7 121 aaPredicted RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 CDKL2Q92772 493 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 STMN2Q93045 179 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 TLCD1Q96CP7 247 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 CAPZA3Q96KX2 299 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 GPR22Q99680 433 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 RBBP8Q99708 897 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 SELENOSQ9BQE4 189 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 ROGDIQ9GZN7 287 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 DRC3Q9H069 523 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 NSRP1Q9H0G5 558 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 CLMPQ9H6B4 373 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 SIAEQ9HAT2 523 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 PARVBQ9HBI1 364 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 TMBIM4Q9HC24 238 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 ADAP2Q9NPF8 381 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 CCL28Q9NRJ3 127 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 STOX2Q9P2F5 926 aaPredicted RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 XCL2Q9UBD3 114 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 DHCR7Q9UBM7 475 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 TAC3Q9UHF0 121 aa2.71□□□□□ -1.98
CDC42BPA-212ENST00000478573 SPTAN1Q13813 2472 aaKnown RBP2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 NUP214P35658 2090 aaPredicted RBP2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 KCNE1BA0A087WTH5 132 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 A0A0G2JN53 185 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 ARGFXA6NJG6 315 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 FAM159BA6NKW6 160 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 H0YGG7 62 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 GOLGA8TH3BQL2 631 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 SLC31A2O15432 143 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms