RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 CBR4Q8N4T8 237 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 Q8N9W7 124 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 SRSF12Q8WXF0 261 aaKnown RBP2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 C22orf15Q8WYQ4 148 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 IL22RA2Q969J5 263 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 FAM104AQ969W3 186 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 DNAJC19Q96DA6 116 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 ZMYND19Q96E35 227 aaPredicted RBP2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 FAM19A4Q96LR4 140 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 KCTD7Q96MP8 289 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 STACQ99469 402 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 SH3GL3Q99963 347 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 NUDT9Q9BW91 350 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 UGT2B28Q9BY64 529 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 MRPS26Q9BYN8 205 aaKnown RBP2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 COA1Q9GZY4 146 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 METTL9Q9H1A3 318 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 CENPHQ9H3R5 247 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 TAS2R13Q9NYV9 303 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 CLCF1Q9UBD9 225 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 OPN4Q9UHM6 478 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 MMACHCQ9Y4U1 282 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 KCNE3Q9Y6H6 103 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 NACAE9PAV3 2078 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 C9orf84Q5VXU9 1444 aa2.51□□□□□ -2.01
SMARCA1-204ENST00000478420 TRBV6-6A0A0A6YYG2 114 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 LOC105371267A0A1B0GV96 52 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 E5RI56 91 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 LINC01619G3V211 115 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 H0YJX3 145 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 H3BNH8 94 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 ACOX3O15254 700 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 FABP7O15540 132 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 FAM189A1O60320 539 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 TTC4O95801 387 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 C6orf47O95873 294 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 IGKV1D-16P01601 117 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 APOEP02649 317 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 IL6P05231 212 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 OR4E1P0C645 316 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 OR5H8P0DN80 308 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 ZNF32P17041 273 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 CELP19835 753 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 RPA3P35244 121 aaPredicted RBP2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 RPS10P46783 165 aaKnown RBP2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 PSMD7P51665 324 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 RAP1GDS1P52306 607 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 AP2S1P53680 142 aaPredicted RBP2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 RAB38P57729 211 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 RANP62826 216 aaKnown RBP2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 SLC35A1P78382 337 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 IL5RAQ01344 420 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 AQP6Q13520 282 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 PRPSAP1Q14558 356 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 TMED2Q15363 201 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 C4orf26Q17RF5 130 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 CEACAM21Q3KPI0 293 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 ANKRD22Q5VYY1 191 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 LPCAT4Q643R3 524 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 SAXO2Q658L1 398 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 NCCRP1Q6ZVX7 275 aaPredicted RBP2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 S100A7AQ86SG5 101 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 CALHM1Q8IU99 346 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 TRAPPC5Q8IUR0 188 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 SLC30A8Q8IWU4 369 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 CHST4Q8NCG5 386 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 CCDC54Q8NEL0 328 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 OR1M1Q8NGA1 313 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 OR4K17Q8NGC6 315 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 OR10AD1Q8NGE0 317 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 OR13G1Q8NGZ3 307 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 OR9G1Q8NH87 305 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 FAM45AQ8TCE6 357 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 DTD1Q8TEA8 209 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 RAD51AP1Q96B01 352 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 TLCD1Q96CP7 247 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 MRAP2Q96G30 205 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 RNF185Q96GF1 192 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 TMEM208Q9BTX3 173 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 SRMSQ9H3Y6 488 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 TMEM27Q9HBJ8 222 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 ABCB9Q9NP78 766 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 NUFIP1Q9UHK0 495 aaKnown RBP2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 VAX2Q9UIW0 290 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 KLK12Q9UKR0 248 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 RAB26Q9ULW5 256 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 TIMM22Q9Y584 194 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 WSB1Q9Y6I7 421 aa2.5□□□□□ -2.01
SMARCA1-204ENST00000478420 ABCC11Q96J66 1382 aa2.49□□□□□ -2.01
SMARCA1-204ENST00000478420 PCDH11XQ9BZA7 1347 aa2.49□□□□□ -2.01
SMARCA1-204ENST00000478420 IGLV3-16A0A075B6K0 115 aa2.49□□□□□ -2.01
SMARCA1-204ENST00000478420 TRAV39A0A0B4J263 110 aa2.49□□□□□ -2.01
SMARCA1-204ENST00000478420 A0A0B4J2A0 478 aa2.49□□□□□ -2.01
SMARCA1-204ENST00000478420 NKX2-6A6NCS4 301 aa2.49□□□□□ -2.01
SMARCA1-204ENST00000478420 H7C417 338 aa2.49□□□□□ -2.01
SMARCA1-204ENST00000478420 CCRL2O00421 344 aa2.49□□□□□ -2.01
SMARCA1-204ENST00000478420 AZIN1O14977 448 aa2.49□□□□□ -2.01
SMARCA1-204ENST00000478420 PFDN6O15212 129 aa2.49□□□□□ -2.01
SMARCA1-204ENST00000478420 CTDNEP1O95476 244 aa2.49□□□□□ -2.01
SMARCA1-204ENST00000478420 RLN2P04090 185 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms