RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 GPR173Q9NS66 373 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 ZNF230Q9UIE0 474 aaPredicted RBP10.61□□□□□ -0.71
PTPRF-212ENST00000477970 MFSD2BA6NFX1 497 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 MTCP1P56278 107 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 FAM3AP98173 230 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 SPINK14Q6IE38 97 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 Q8NFD4 153 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 PIGTQ969N2 578 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 SIGLEC12Q96PQ1 595 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 PDCD10Q9BUL8 212 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 DCHS1Q96JQ0 3298 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 LCATP04180 440 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 M6PRP20645 277 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 ZSCAN4Q8NAM6 433 aaPredicted RBP10.61□□□□□ -0.71
PTPRF-212ENST00000477970 PPP1R1CQ8WVI7 109 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 PPA2Q9H2U2 334 aa10.61□□□□□ -0.71
PTPRF-212ENST00000477970 NOSIPQ9Y314 301 aaKnown RBP10.61□□□□□ -0.71
PTPRF-212ENST00000477970 ZNF816-ZNF321PA0A0X1KG74 233 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 RNF222A6NCQ9 220 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 NRASP01111 189 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 CRHP06850 196 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 OR3A2P47893 321 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 OR1C1Q15619 314 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 CSNK2A3Q8NEV1 391 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 COQ8AQ8NI60 647 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 ABHD3Q8WU67 409 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 RBPMSQ93062 196 aaKnown RBP10.6□□□□□ -0.71
PTPRF-212ENST00000477970 ZNF845Q96IR2 970 aaPredicted RBP10.6□□□□□ -0.71
PTPRF-212ENST00000477970 TTTY12Q9BZ98 90 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 NUP50Q9UKX7 468 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 IGKV1-27A0A075B6S5 117 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 RPS2P15880 293 aaKnown RBP10.6□□□□□ -0.71
PTPRF-212ENST00000477970 AKR1C4P17516 323 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 PLEKHN1Q494U1 663 aaPredicted RBP10.6□□□□□ -0.71
PTPRF-212ENST00000477970 RPUSD3Q6P087 351 aaKnown RBP10.6□□□□□ -0.71
PTPRF-212ENST00000477970 IGF2-ASQ6U949 168 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 MDS2Q8NDY4 140 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 OR5D18Q8NGL1 313 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 AKR7LQ8NHP1 331 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 SPTBN4Q9H254 2564 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 FAM90A10PA6NDY2 464 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 FAM90A18PA6NE21 464 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 FAM90A16PA6NEW6 464 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 FAM90A20PA6NIJ5 464 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 FAM90A8PA6NJQ4 464 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 FAM90A7PA6NKC0 464 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 FAM90A22PA8MWA6 464 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 FAM90A12PA8MX19 464 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 FAM90A5PA8MXJ8 464 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 FAM90A23PA8MXZ1 464 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 PRSS44E7EML9 344 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 NME2P1O60361 137 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 SS18L1O75177 396 aaPredicted RBP10.6□□□□□ -0.71
PTPRF-212ENST00000477970 MRPL33O75394 65 aaKnown RBP10.6□□□□□ -0.71
PTPRF-212ENST00000477970 FAM90A15PP0C7V4 464 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 FAM90A13PP0C7W8 464 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 FAM90A14PP0C7W9 464 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 FAM90A24PP0C7X0 464 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 NME2P22392 152 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 ATP1B3P54709 279 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 OR2AE1Q8NHA4 323 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 THAP6Q8TBB0 222 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 NPRL2Q8WTW4 380 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 ST8SIA2Q92186 375 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 BORCS8Q96FH0 119 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 FER1L6-AS2Q96M78 137 aa10.6□□□□□ -0.71
PTPRF-212ENST00000477970 KLF13Q9Y2Y9 288 aaPredicted RBP10.6□□□□□ -0.71
PTPRF-212ENST00000477970 SYNGR4O95473 234 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 TMEM225BP0DP42 221 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 CHATP28329 748 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 SUPT4H1P63272 117 aaKnown RBP10.59□□□□□ -0.71
PTPRF-212ENST00000477970 RNPS1Q15287 305 aaKnown RBP10.59□□□□□ -0.71
PTPRF-212ENST00000477970 RSU1Q15404 277 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 TSPO2Q5TGU0 170 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 SIGIRRQ6IA17 410 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 CLEC18BQ6UXF7 455 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 HSD17B13Q7Z5P4 300 aaPredicted RBP10.59□□□□□ -0.71
PTPRF-212ENST00000477970 DPPA2Q7Z7J5 298 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 FGFBP3Q8TAT2 258 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 ACKR4Q9NPB9 350 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 MCTS1Q9ULC4 181 aaKnown RBP10.59□□□□□ -0.71
PTPRF-212ENST00000477970 A0A1B0GW55 424 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 KANTRA0A1W2PQU2 76 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 TPD52L2O43399 206 aaKnown RBP10.59□□□□□ -0.71
PTPRF-212ENST00000477970 ACTL6AO96019 429 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 DUX4L2P0CJ85 424 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 DUX4L3P0CJ86 424 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 DUX4L4P0CJ87 422 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 DUX4L5P0CJ88 424 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 DUX4L6P0CJ89 424 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 DUX4L7P0CJ90 424 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 EDN3P14138 238 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 VAMP1P23763 118 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 PSMB6P28072 239 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 SOX8P57073 446 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 CHRFAM7AQ494W8 412 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 C1QTNF12Q5T7M4 302 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 SAXO1Q8IYX7 474 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 OR10K1Q8NGX5 313 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 STOML3Q8TAV4 291 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms