RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 AKR7A3O95154 331 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 NDUFB2O95178 105 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 VAMP5O95183 116 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 IGF2P01344 180 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 BGLAPP02818 100 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 GABRA1P14867 456 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 CPN1P15169 458 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 ZNF708P17019 499 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 ZNF43P17038 809 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 AHCYP23526 432 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 ZBTB25P24278 435 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 VHLP40337 213 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 OMPP47874 163 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 GSSP48637 474 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 HSPA13P48723 471 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 LHX2P50458 406 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 DAPP51397 102 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 SUCLG1P53597 346 aaKnown RBP3.02□□□□□ -1.93
UBR3-209ENST00000477461 CTBP2P56545 445 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 CLDN18P56856 261 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 PRPS1P60891 318 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 TSPAN31Q12999 210 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 TMEM44Q2T9K0 475 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 SLC36A3Q495N2 470 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 ZBED5Q49AG3 693 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 OGFRL1Q5TC84 451 aaPredicted RBP3.02□□□□□ -1.93
UBR3-209ENST00000477461 LPCAT4Q643R3 524 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 C1orf94Q6P1W5 598 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 SMARCD3Q6STE5 483 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 CASP12Q6UXS9 341 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 WDR88Q6ZMY6 472 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 RASSF6Q6ZTQ3 369 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 HDDC2Q7Z4H3 204 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 ADCK1Q86TW2 530 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 HS3ST5Q8IZT8 346 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 CD177Q8N6Q3 437 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 BEST4Q8NFU0 473 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 OR13C2Q8NGS9 318 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 OR5J2Q8NH18 312 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 OR51A7Q8NH64 312 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 OR10D3Q8NH80 312 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 FAM57AQ8TBR7 257 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 FANK1Q8TC84 345 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 CYGBQ8WWM9 190 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 PTP4A1Q93096 173 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 PLEKHA8Q96JA3 519 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 ARL5BQ96KC2 179 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 TNFRSF13CQ96RJ3 184 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 SPAG8Q99932 426 aaPredicted RBP3.02□□□□□ -1.93
UBR3-209ENST00000477461 ZNF426Q9BUY5 554 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 TSSK6Q9BXA6 273 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 PRRG3Q9BZD7 231 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 SLITRK2Q9H156 845 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 OR52D1Q9H346 318 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 RIBC2Q9H4K1 309 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 Q9H521 79 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 COQ10BQ9H8M1 238 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 PLEKHA3Q9HB20 300 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 MEPEQ9NQ76 525 aaPredicted RBP3.02□□□□□ -1.93
UBR3-209ENST00000477461 INIPQ9NRY2 104 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 SMPD3Q9NY59 655 aaPredicted RBP3.02□□□□□ -1.93
UBR3-209ENST00000477461 MRPL39Q9NYK5 338 aaKnown RBP3.02□□□□□ -1.93
UBR3-209ENST00000477461 USE1Q9NZ43 259 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 EMC3Q9P0I2 261 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 ZNF581Q9P0T4 197 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 SPRR3Q9UBC9 169 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 BAIAP2Q9UQB8 552 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 RASD1Q9Y272 281 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 ZNF175Q9Y473 711 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 CDH10Q9Y6N8 788 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 LAMA1P25391 3075 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 VPS13AQ96RL7 3174 aa3.02□□□□□ -1.93
UBR3-209ENST00000477461 ANKRD11Q6UB99 2663 aaPredicted RBP3.01□□□□□ -1.93
UBR3-209ENST00000477461 MED12LQ86YW9 2145 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 CHD8Q9HCK8 2581 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 IGHV3-15A0A0B4J1V0 119 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 A6NIZ1 184 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 SLC22A20A6NK97 555 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 ZNF726A6NNF4 738 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 RIIAD1A6NNX1 92 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 FTCDNL1E5RQL4 147 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 H0YC42 278 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 H0YJX3 145 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 M0R3G1 203 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 PLPP3O14495 311 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 XKRYO14609 159 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 CDC42EP2O14613 210 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 GPR171O14626 319 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 SLC19A2O60779 497 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 SOX14O95416 240 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 RENP00797 406 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 IFNGP01579 166 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 HMGN1P05114 100 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 HCKP08631 526 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 ASAH2BP0C7U1 165 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 NR2C1P13056 603 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 PAICSP22234 425 aaKnown RBP3.01□□□□□ -1.93
UBR3-209ENST00000477461 ACVR1BP36896 505 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 AQP2P41181 271 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 DAP3P51398 398 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms