RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 H2BFSP57053 126 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 PBDC1Q9BVG4 233 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 SSUH2Q9Y2M2 353 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 UNC80Q8N2C7 3258 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 IGKV3D-11A0A0A0MRZ8 115 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 RAB27BO00194 218 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 PLAURQ03405 335 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 DNASE2BQ8WZ79 361 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 SDSLQ96GA7 329 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 FBXO7Q9Y3I1 522 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 HS3ST3B1Q9Y662 390 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 AQP7P3A6NL99 342 aa9.71□□□□□ -0.85
COL27A1-204ENST00000477421 TO15178 435 aa9.71□□□□□ -0.85
COL27A1-204ENST00000477421 ST8SIA3O43173 380 aa9.71□□□□□ -0.85
COL27A1-204ENST00000477421 GABRA1P14867 456 aa9.71□□□□□ -0.85
COL27A1-204ENST00000477421 CPN1P15169 458 aa9.71□□□□□ -0.85
COL27A1-204ENST00000477421 THBS4P35443 961 aa9.71□□□□□ -0.85
COL27A1-204ENST00000477421 RAC3P60763 192 aa9.71□□□□□ -0.85
COL27A1-204ENST00000477421 ROM1Q03395 351 aa9.71□□□□□ -0.85
COL27A1-204ENST00000477421 OR2T2Q6IF00 324 aa9.71□□□□□ -0.85
COL27A1-204ENST00000477421 ZNF519Q8TB69 540 aa9.71□□□□□ -0.85
COL27A1-204ENST00000477421 EDEM2Q9BV94 578 aa9.71□□□□□ -0.85
COL27A1-204ENST00000477421 FAM212BQ9NTI7 297 aaPredicted RBP9.71□□□□□ -0.85
COL27A1-204ENST00000477421 CYB5R1Q9UHQ9 305 aa9.71□□□□□ -0.85
COL27A1-204ENST00000477421 PCDHB10Q9UN67 800 aa9.71□□□□□ -0.85
COL27A1-204ENST00000477421 LHFPL6Q9Y693 200 aa9.71□□□□□ -0.85
COL27A1-204ENST00000477421 OR6C6A6NF89 314 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 SERPINE3A8MV23 424 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 J3QRE1 110 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 MSTNO14793 375 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 TIMM8AO60220 97 aaPredicted RBP9.71□□□□□ -0.86
COL27A1-204ENST00000477421 CST7O76096 145 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 SSBP1Q04837 148 aaKnown RBP9.71□□□□□ -0.86
COL27A1-204ENST00000477421 PMS2CLQ68D20 193 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 DRAM2Q6UX65 266 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 WDR5BQ86VZ2 330 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 ZFP82Q8N141 532 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 SAP25Q8TEE9 199 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 CT55Q8WUE5 264 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 WDR13Q9H1Z4 485 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 PPP1R3CQ9UQK1 317 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 VSIG4Q9Y279 399 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 KIAA2026Q5HYC2 2103 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 DEGS1O15121 323 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 OR13C7P0DN81 318 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 TFAP2EQ6VUC0 442 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 OR2W3Q7Z3T1 314 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 OR5M8Q8NGP6 311 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 C2orf50Q96LR7 162 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 LINC00052Q96N35 136 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 ZFP57Q9NU63 452 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 RNF150Q9ULK6 438 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 WNK2Q9Y3S1 2297 aa9.71□□□□□ -0.86
COL27A1-204ENST00000477421 DENND4CQ5VZ89 1909 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 TRBV5-7A0A0A0MS05 114 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 TRAV39A0A0B4J263 110 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 ATP6V1G2-DDX39BF2Z307 99 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 GEMIN2O14893 280 aaKnown RBP9.7□□□□□ -0.86
COL27A1-204ENST00000477421 TBPP20226 339 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 NKX2-1P43699 371 aaPredicted RBP9.7□□□□□ -0.86
COL27A1-204ENST00000477421 SCAND1P57086 179 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 CLEC18BQ6UXF7 455 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 Q6ZRG5 221 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 ZNF808Q8N4W9 903 aaPredicted RBP9.7□□□□□ -0.86
COL27A1-204ENST00000477421 CPNE4Q96A23 557 aaPredicted RBP9.7□□□□□ -0.86
COL27A1-204ENST00000477421 CNTNAP3Q9BZ76 1288 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 RAB33BQ9H082 229 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 ABCA1O95477 2261 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 ZNF816-ZNF321PA0A0X1KG74 233 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 PLSCR5A0PG75 271 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 PRR19A6NJB7 356 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 BCL2L11O43521 198 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 SNAPINO95295 136 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 LIFP15018 202 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 MRPS34P82930 218 aaKnown RBP9.7□□□□□ -0.86
COL27A1-204ENST00000477421 SPEM2Q0P670 501 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 PIGYQ3MUY2 71 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 DPPA2Q7Z7J5 298 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 LILRB1Q8NHL6 650 aaPredicted RBP9.7□□□□□ -0.86
COL27A1-204ENST00000477421 KCNE4Q8WWG9 221 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 GNG12Q9UBI6 72 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 DIDO1Q9BTC0 2240 aaKnown RBP9.7□□□□□ -0.86
COL27A1-204ENST00000477421 FRMPD3Q5JV73 1810 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 DUS4LO95620 317 aaKnown RBP9.7□□□□□ -0.86
COL27A1-204ENST00000477421 BTCP35070 178 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 MAGEA5P43359 124 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 LIMK1P53667 647 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 ZNF674Q2M3X9 581 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 TUSC5Q8IXB3 177 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 EXTL1Q92935 676 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 PIGMQ9H3S5 423 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 FAM96BQ9Y3D0 163 aa9.7□□□□□ -0.86
COL27A1-204ENST00000477421 SHISA7A6NL88 538 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 TRAF3IP2O43734 574 aaPredicted RBP9.69□□□□□ -0.86
COL27A1-204ENST00000477421 SSSCA1O60232 199 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 CNR1P21554 472 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 SRD5A2P31213 254 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 EDDM3BP56851 147 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 PEA15Q15121 130 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 RAB35Q15286 201 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms