RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ZDHHC23Q8IYP9 409 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 ARHGAP24Q8N264 748 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 BEND2Q8NDZ0 799 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 FAM110DQ8TAY7 271 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-214ENST00000477152 OTULINQ96BN8 352 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 RNF170Q96K19 258 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 NPFFR1Q9GZQ6 430 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 TLNRD1Q9H1K6 362 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 MAGIXQ9H6Y5 334 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 SIRT7Q9NRC8 400 aa5.95□□□□□ -1.46
BRCA1-214ENST00000477152 hCG_38984A0A1B0GV85 526 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 DHRS12A0PJE2 317 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 ARPC2O15144 300 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 MTRF1O75570 445 aaKnown RBP5.94□□□□□ -1.46
BRCA1-214ENST00000477152 DCTN3O75935 186 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 ALDOBP05062 364 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 HMGN1P05114 100 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 LYNP07948 512 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 SLC2A1P11166 492 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 RBMXP38159 391 aaKnown RBP5.94□□□□□ -1.46
BRCA1-214ENST00000477152 KIR2DS4P43632 304 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 GABRA2P47869 451 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 CAPZA1P52907 286 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 ZNF121P58317 390 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-214ENST00000477152 ACTR3P61158 418 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 SRSF4Q08170 494 aaKnown RBP5.94□□□□□ -1.46
BRCA1-214ENST00000477152 LRRC75BQ2VPJ9 315 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 LCN1P1Q5VSP4 162 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 STUMQ69YW2 141 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 KCTD18Q6PI47 426 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-214ENST00000477152 RNF148Q8N7C7 305 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 AQP11Q8NBQ7 271 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 OR51L1Q8NGJ5 315 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 RNF133Q8WVZ7 376 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 PIGCQ92535 297 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 SGK3Q96BR1 496 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 SNX22Q96L94 193 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 RAB3IPQ96QF0 476 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-214ENST00000477152 CDRT15Q96T59 188 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 PPA2Q9H2U2 334 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 ZNF556Q9HAH1 456 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 NLKQ9UBE8 527 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 LYVE1Q9Y5Y7 322 aa5.94□□□□□ -1.46
BRCA1-214ENST00000477152 OR5B21A6NL26 309 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 DBX1A6NMT0 343 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 PRR23D1E9PI22 279 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-214ENST00000477152 H3BN98 237 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 SLC1A7O00341 560 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 ACOT8O14734 319 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 SIGLEC5O15389 551 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 ACAA1P09110 424 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-214ENST00000477152 PRR23D2P0DMB1 279 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-214ENST00000477152 SAA4P35542 130 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 GNG3P63215 75 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 NHLH2Q02577 135 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 PRDX4Q13162 271 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 CRMP1Q14194 572 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 MICAQ29983 383 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 FBLN7Q53RD9 439 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 ZNF788Q6ZQV5 615 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 THEM6Q8WUY1 208 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 TAF15Q92804 592 aaKnown RBP eCLIP5.93□□□□□ -1.466e-6■□□□□ 11.2
BRCA1-214ENST00000477152 DDOQ99489 341 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 SSX3Q99909 188 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 ABHD6Q9BV23 337 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 CDCA4Q9BXL8 241 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 DGCR6LQ9BY27 220 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 MYLK2Q9H1R3 596 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 ABCB10Q9NRK6 738 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 CMC2Q9NRP2 79 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 FAM30AQ9NZY2 134 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 ACTR3BQ9P1U1 418 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 PITPNC1Q9UKF7 332 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 SAMHD1Q9Y3Z3 626 aaKnown RBP5.93□□□□□ -1.46
BRCA1-214ENST00000477152 LRP12Q9Y561 859 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 MAB21L2Q9Y586 359 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 OR2AT4A6NND4 320 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 ZNF850A8MQ14 1090 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 GNGT2O14610 69 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 ANGPTL7O43827 346 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 RPS27P42677 84 aaKnown RBP5.93□□□□□ -1.46
BRCA1-214ENST00000477152 SMIM21Q3B7S5 101 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 SLC35D3Q5M8T2 416 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 SLC35E4Q6ICL7 350 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 OR2T5Q6IEZ7 315 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 KRT77Q7Z794 578 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 COMMD2Q86X83 199 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 CALHM1Q8IU99 346 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 C11orf53Q8IXP5 236 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 FAM185AQ8N0U4 392 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 ZNF561Q8N587 486 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 FAM216BQ8N7L0 139 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 TMEM185AQ8NFB2 350 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 OR4F17Q8NGA8 305 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 OR5A2Q8NGI9 324 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 OR2T29Q8NH02 315 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 OR5P3Q8WZ94 311 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 DUS3LQ96G46 650 aaKnown RBP5.93□□□□□ -1.46
BRCA1-214ENST00000477152 OR4F4Q96R69 305 aa5.93□□□□□ -1.46
BRCA1-214ENST00000477152 NMNAT2Q9BZQ4 307 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms