RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 LHX2P50458 406 aa12.24□□□□□ -0.45
UBXN11-214ENST00000475591 TAS2R31P59538 309 aa12.24□□□□□ -0.45
UBXN11-214ENST00000475591 FAM3AP98173 230 aa12.24□□□□□ -0.45
UBXN11-214ENST00000475591 RSU1Q15404 277 aa12.24□□□□□ -0.45
UBXN11-214ENST00000475591 FAM189A2Q15884 450 aa12.24□□□□□ -0.45
UBXN11-214ENST00000475591 C3AR1Q16581 482 aa12.24□□□□□ -0.45
UBXN11-214ENST00000475591 KRTAP27-1Q3LI81 207 aa12.24□□□□□ -0.45
UBXN11-214ENST00000475591 PIGYQ3MUY2 71 aa12.24□□□□□ -0.45
UBXN11-214ENST00000475591 CHRFAM7AQ494W8 412 aa12.24□□□□□ -0.45
UBXN11-214ENST00000475591 ABHD17BQ5VST6 288 aa12.24□□□□□ -0.45
UBXN11-214ENST00000475591 PEG10Q86TG7 708 aaKnown RBP12.24□□□□□ -0.45
UBXN11-214ENST00000475591 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.24□□□□□ -0.45
UBXN11-214ENST00000475591 EMG1Q92979 244 aaKnown RBP12.24□□□□□ -0.45
UBXN11-214ENST00000475591 ZNF471Q9BX82 626 aaPredicted RBP12.24□□□□□ -0.45
UBXN11-214ENST00000475591 NOSIPQ9Y314 301 aaKnown RBP12.24□□□□□ -0.45
UBXN11-214ENST00000475591 LOC400499M0QZD8 3231 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 A0A0D9SG52 128 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 KANTRA0A1W2PQU2 76 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 CEACAM18A8MTB9 384 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 SERPINE3A8MV23 424 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 SFT2D2O95562 160 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 KNG1P01042 644 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 NRASP01111 189 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 CRHP06850 196 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 CCL2P13500 99 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 PABPC1L2AQ5JQF8 200 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 DHRS13Q6UX07 377 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 OVCH2Q7RTZ1 564 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 TMEM185AQ8NFB2 350 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 SUN5Q8TC36 379 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 CDC6Q99741 560 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 METTL9Q9H1A3 318 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 CHMP1AQ9HD42 196 aaPredicted RBP12.23□□□□□ -0.45
UBXN11-214ENST00000475591 SLC7A10Q9NS82 523 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 CSAG2Q9Y5P2 127 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 R4GN57 208 aa12.23□□□□□ -0.45
UBXN11-214ENST00000475591 FAM221AA4D161 298 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 BCL2L11O43521 198 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 OR2F2O95006 317 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 CSTBP04080 98 aaKnown RBP12.22□□□□□ -0.45
UBXN11-214ENST00000475591 MMP7P09237 267 aaPredicted RBP12.22□□□□□ -0.45
UBXN11-214ENST00000475591 OPRM1P35372 400 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 TAS2R46P59540 309 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 OR2F1Q13607 317 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 OR1C1Q15619 314 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 RPUSD3Q6P087 351 aaKnown RBP12.22□□□□□ -0.45
UBXN11-214ENST00000475591 UNQ6126/PRO20091Q6UXV3 157 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 ACOT7LQ6ZUV0 252 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 TUSC5Q8IXB3 177 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 ZSCAN4Q8NAM6 433 aaPredicted RBP12.22□□□□□ -0.45
UBXN11-214ENST00000475591 THAP6Q8TBB0 222 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 SPSB1Q96BD6 273 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 BORCS8Q96FH0 119 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 FAM173AQ9BQD7 235 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 CALHM2Q9HA72 323 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 hCG_38984A0A1B0GV85 526 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 H0YIZ8 118 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 RPS2P15880 293 aaKnown RBP12.22□□□□□ -0.45
UBXN11-214ENST00000475591 CLDN18P56856 261 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 UBA52P62987 128 aaKnown RBP12.22□□□□□ -0.45
UBXN11-214ENST00000475591 ZNF345Q14585 488 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 DCAF10Q5QP82 559 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 RIPPLY2Q5TAB7 128 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 PDZD9Q8IXQ8 264 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 PIGCQ92535 297 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 AK3Q9UIJ7 227 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 MRPS18CQ9Y3D5 142 aaKnown RBP12.22□□□□□ -0.45
UBXN11-214ENST00000475591 FREM1Q5H8C1 2179 aa12.22□□□□□ -0.45
UBXN11-214ENST00000475591 GEMIN2O14893 280 aaKnown RBP12.21□□□□□ -0.45
UBXN11-214ENST00000475591 MRPL33O75394 65 aaKnown RBP12.21□□□□□ -0.45
UBXN11-214ENST00000475591 PGAM2P15259 253 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 CCNOP22674 350 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 PSMB6P28072 239 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 RBP2P50120 134 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 ARF1P84077 181 aaKnown RBP12.21□□□□□ -0.45
UBXN11-214ENST00000475591 CNN3Q15417 329 aaKnown RBP12.21□□□□□ -0.45
UBXN11-214ENST00000475591 ZNF528Q3MIS6 628 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 TMEM17Q86X19 198 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 FNDC9Q8TBE3 224 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 RRNAD1Q96FB5 475 aaKnown RBP12.21□□□□□ -0.45
UBXN11-214ENST00000475591 OR10C1Q96KK4 312 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 SULT4A1Q9BR01 284 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 ZNF2Q9BSG1 426 aaPredicted RBP12.21□□□□□ -0.45
UBXN11-214ENST00000475591 RNF126Q9BV68 326 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 TTTY12Q9BZ98 90 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 LIME1Q9H400 295 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 CRIM1Q9NZV1 1036 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 GPR160Q9UJ42 338 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 SPENQ96T58 3664 aaKnown RBP12.21□□□□□ -0.45
UBXN11-214ENST00000475591 ZNF503-AS2A6NEH8 195 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 TERTO14746 1132 aaKnown RBP12.21□□□□□ -0.45
UBXN11-214ENST00000475591 SFTPBP07988 381 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 PTGER4P35408 488 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 ATP1A1-AS1Q5TC04 95 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 PLCXD3Q63HM9 321 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 TMEM42Q69YG0 159 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 MOB3CQ70IA8 216 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 DCUN1D4Q92564 292 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 PFDN2Q9UHV9 154 aa12.21□□□□□ -0.45
UBXN11-214ENST00000475591 MT-CO3P00414 261 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms