RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 NRGNQ92686 78 aa12.79□□□□□ -0.36
MCF2L-224ENST00000475524 GFI1Q99684 422 aa12.79□□□□□ -0.36
MCF2L-224ENST00000475524 FAM192AQ9GZU8 254 aa12.79□□□□□ -0.36
MCF2L-224ENST00000475524 CHODLQ9H9P2 273 aa12.79□□□□□ -0.36
MCF2L-224ENST00000475524 TMEM106BQ9NUM4 274 aa12.79□□□□□ -0.36
MCF2L-224ENST00000475524 RASL12Q9NYN1 266 aa12.79□□□□□ -0.36
MCF2L-224ENST00000475524 RNF7Q9UBF6 113 aa12.79□□□□□ -0.36
MCF2L-224ENST00000475524 RSL24D1Q9UHA3 163 aaKnown RBP12.79□□□□□ -0.36
MCF2L-224ENST00000475524 AK6Q9Y3D8 172 aaKnown RBP12.79□□□□□ -0.36
MCF2L-224ENST00000475524 NPTNQ9Y639 398 aa12.79□□□□□ -0.36
MCF2L-224ENST00000475524 FBN2P35556 2912 aa12.79□□□□□ -0.36
MCF2L-224ENST00000475524 CELSR2Q9HCU4 2923 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 A0A0G2JK05 382 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 DPPA5A6NC42 116 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 IFITM5A6NNB3 132 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 SRRM5B3KS81 715 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 H3BMQ9 156 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 NDUFS8O00217 210 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 CDIPTO14735 213 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 KDM4BO94953 1096 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 CDRT1O95170 752 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 LHBP01229 141 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 IGHV4-39P01824 125 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 PGA5P0DJD9 388 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 SERPINB10P48595 397 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 ATP5J2P56134 94 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 TMEM33P57088 247 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 DSCR9P59020 149 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 VBP1P61758 197 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 LSM3P62310 102 aaKnown RBP12.78□□□□□ -0.36
MCF2L-224ENST00000475524 DYNC1I2Q13409 638 aaKnown RBP12.78□□□□□ -0.36
MCF2L-224ENST00000475524 SPRNQ5BIV9 151 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 DMRTC1Q5HYR2 192 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 ELP2Q6IA86 826 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 SLC25A26Q70HW3 274 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 CDH24Q86UP0 819 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 FAM90A1Q86YD7 464 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 TNFAIP8L1Q8WVP5 186 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 DGCR14Q96DF8 476 aaKnown RBP12.78□□□□□ -0.36
MCF2L-224ENST00000475524 POM121Q96HA1 1249 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 SPACA5Q96QH8 159 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 NRIP2Q9BQI9 281 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 RNF167Q9H6Y7 350 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 CNTD2Q9H8S5 307 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 UFSP2Q9NUQ7 469 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 C1orf123Q9NWV4 160 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 UNC79Q9P2D8 2635 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 LRBAP50851 2863 aa12.78□□□□□ -0.36
MCF2L-224ENST00000475524 hCG_1807616A0A1W2PRN6 198 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 CLDN25C9JDP6 229 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 TMEM178BH3BS89 294 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 TMEM225BP0DP42 221 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 GIFP27352 417 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 HTR2CP28335 458 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 PMELP40967 661 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 POU3F4P49335 361 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 ERVK11-1P61568 191 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 SFXN4Q6P4A7 337 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 PRSS57Q6UWY2 283 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 ANGPTL5Q86XS5 388 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 OR51F2Q8NH61 342 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 SLC25A46Q96AG3 418 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 C12orf43Q96C57 262 aaKnown RBP12.77□□□□□ -0.37
MCF2L-224ENST00000475524 KCTD12Q96CX2 325 aaKnown RBP12.77□□□□□ -0.37
MCF2L-224ENST00000475524 MRPS24Q96EL2 167 aaKnown RBP12.77□□□□□ -0.37
MCF2L-224ENST00000475524 CEP19Q96LK0 163 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 S100A13Q99584 98 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 DCSTAMPQ9H295 470 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 SEBOXQ9HB31 216 aaPredicted RBP12.77□□□□□ -0.37
MCF2L-224ENST00000475524 PLGRKTQ9HBL7 147 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 HES4Q9HCC6 221 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 SMURF1Q9HCE7 757 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 FBLN5Q9UBX5 448 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 STEAP1Q9UHE8 339 aa12.77□□□□□ -0.37
MCF2L-224ENST00000475524 MRPS28Q9Y2Q9 187 aaKnown RBP12.77□□□□□ -0.37
MCF2L-224ENST00000475524 CCDC160A6NGH7 325 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 A6NHS1 94 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 TRAPPC2LH3BP13 241 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 SYNGR1O43759 233 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 BPNT1O95861 308 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 MUC1P15941 1255 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-224ENST00000475524 RPS19P39019 145 aaKnown RBP12.76□□□□□ -0.37
MCF2L-224ENST00000475524 OR3A4PP47883 348 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 PDLIM4P50479 330 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 RAB11BQ15907 218 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 DGUOKQ16854 277 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 AWAT2Q6E213 333 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 DNM1P46Q6ZS02 220 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 OR2W3Q7Z3T1 314 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 PEG10Q86TG7 708 aaKnown RBP12.76□□□□□ -0.37
MCF2L-224ENST00000475524 NR2C2APQ86WQ0 139 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 GCSAMQ8N6F7 178 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 OR4D6Q8NGJ1 314 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 LRRC29Q8WV35 223 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 CCL17Q92583 94 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 YIPF5Q969M3 257 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 RFT1Q96AA3 541 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 TIMD4Q96H15 378 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 METTL9Q9H1A3 318 aa12.76□□□□□ -0.37
MCF2L-224ENST00000475524 MTCH1Q9NZJ7 389 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms