RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 ACP7Q6ZNF0 438 aa10.13□□□□□ -0.79
SKA3-206ENST00000475251 KRT74Q7RTS7 529 aa10.13□□□□□ -0.79
SKA3-206ENST00000475251 C16orf82Q7Z2V1 217 aa10.13□□□□□ -0.79
SKA3-206ENST00000475251 DYNAPQ8N1N2 210 aa10.13□□□□□ -0.79
SKA3-206ENST00000475251 POC1AQ8NBT0 407 aa10.13□□□□□ -0.79
SKA3-206ENST00000475251 OR11H6Q8NGC7 330 aa10.13□□□□□ -0.79
SKA3-206ENST00000475251 OR4M1Q8NGD0 313 aa10.13□□□□□ -0.79
SKA3-206ENST00000475251 OR8D4Q8NGM9 314 aa10.13□□□□□ -0.79
SKA3-206ENST00000475251 CAPSLQ8WWF8 208 aa10.13□□□□□ -0.79
SKA3-206ENST00000475251 CMTM5Q96DZ9 223 aa10.13□□□□□ -0.79
SKA3-206ENST00000475251 FGF23Q9GZV9 251 aaPredicted RBP10.13□□□□□ -0.79
SKA3-206ENST00000475251 COL7A1Q02388 2944 aa10.13□□□□□ -0.79
SKA3-206ENST00000475251 ST8SIA5O15466 376 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 CLUP10909 449 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 ATP6V1B1P15313 513 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 HMGA2P52926 109 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 KRTAP10-11P60412 298 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 DYNC1I2Q13409 638 aaKnown RBP10.12□□□□□ -0.79
SKA3-206ENST00000475251 IL18R1Q13478 541 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 ZNF273Q14593 569 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 CEP78Q5JTW2 689 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 MINOS1Q5TGZ0 78 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 LCN1P1Q5VSP4 162 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 ZNF770Q6IQ21 691 aaPredicted RBP10.12□□□□□ -0.79
SKA3-206ENST00000475251 LCN8Q6JVE9 175 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 CCDC121Q6ZUS5 278 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 CD177Q8N6Q3 437 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 OR9Q2Q8NGE9 314 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 NSMCE2Q96MF7 247 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 BTBD10Q9BSF8 475 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 MCRIP2Q9BUT9 160 aaKnown RBP10.12□□□□□ -0.79
SKA3-206ENST00000475251 CMC2Q9NRP2 79 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 POLDIP2Q9Y2S7 368 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 MINOS1-NBL1R4GNA1 71 aa10.12□□□□□ -0.79
SKA3-206ENST00000475251 TNFRSF11BO00300 401 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 GSC2O15499 205 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 CCNB2O95067 398 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 TK1P04183 234 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 NHLRC4P0CG21 123 aaPredicted RBP10.11□□□□□ -0.79
SKA3-206ENST00000475251 ARHGDIBP52566 201 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 SLC34A1Q06495 639 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 RIPPLY1Q0D2K3 151 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 TMEM95Q3KNT9 176 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 KLHL22Q53GT1 634 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 KHDC1LQ5JSQ8 128 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 ZBTB49Q6ZSB9 765 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 COMMD2Q86X83 199 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 ZNF573Q86YE8 665 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 OR51D1Q8NGF3 324 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 OR8B12Q8NGG6 310 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 OTOSQ8NHW6 89 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 THEM6Q8WUY1 208 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 OTULINQ96BN8 352 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 LYZL4Q96KX0 146 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 AMELYQ99218 206 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 LYVE1Q9Y5Y7 322 aa10.11□□□□□ -0.79
SKA3-206ENST00000475251 A0A0U1RQV5 110 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 ACOD1A6NK06 481 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 NOS1APO75052 506 aaPredicted RBP10.1□□□□□ -0.79
SKA3-206ENST00000475251 DNAJC8O75937 253 aaPredicted RBP10.1□□□□□ -0.79
SKA3-206ENST00000475251 NXPH2O95156 264 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 GASTP01350 101 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 PGA5P0DJD9 388 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 ZNF728P0DKX0 622 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 IGHV1-8P0DP01 117 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 PIPP12273 146 aaPredicted RBP10.1□□□□□ -0.79
SKA3-206ENST00000475251 H2AFXP16104 143 aaPredicted RBP10.1□□□□□ -0.79
SKA3-206ENST00000475251 PLCXD3Q63HM9 321 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 Q6ZS46 218 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 MOB3CQ70IA8 216 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 RNF148Q8N7C7 305 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 AQP11Q8NBQ7 271 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 OR4Q3Q8NH05 313 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 NDNFQ8TB73 568 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 TEX47Q8TBZ9 253 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 MYDGFQ969H8 173 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 INPP5EQ9NRR6 644 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 ENPP5Q9UJA9 477 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.1□□□□□ -0.79
SKA3-206ENST00000475251 TENM3Q9P273 2699 aa10.1□□□□□ -0.79
SKA3-206ENST00000475251 FAM90A22PA8MWA6 464 aa10.09□□□□□ -0.79
SKA3-206ENST00000475251 J3QT63 122 aa10.09□□□□□ -0.79
SKA3-206ENST00000475251 HSD17B1P14061 328 aa10.09□□□□□ -0.79
SKA3-206ENST00000475251 HOXD3P31249 432 aaPredicted RBP10.09□□□□□ -0.79
SKA3-206ENST00000475251 HAAOP46952 286 aa10.09□□□□□ -0.79
SKA3-206ENST00000475251 DLX6P56179 175 aa10.09□□□□□ -0.79
SKA3-206ENST00000475251 ZNF684Q5T5D7 378 aa10.09□□□□□ -0.79
SKA3-206ENST00000475251 UNQ9370/PRO34162Q6UXP9 181 aa10.09□□□□□ -0.79
SKA3-206ENST00000475251 GDPD3Q7L5L3 318 aa10.09□□□□□ -0.79
SKA3-206ENST00000475251 KRT77Q7Z794 578 aa10.09□□□□□ -0.79
SKA3-206ENST00000475251 ASCC1Q8N9N2 400 aaKnown RBP10.09□□□□□ -0.79
SKA3-206ENST00000475251 ZNF714Q96N38 554 aa10.09□□□□□ -0.79
SKA3-206ENST00000475251 OR8B4Q96RC9 309 aa10.09□□□□□ -0.79
SKA3-206ENST00000475251 OR51V1Q9H2C8 321 aa10.09□□□□□ -0.79
SKA3-206ENST00000475251 LIN7BQ9HAP6 207 aa10.09□□□□□ -0.79
SKA3-206ENST00000475251 ARMC1Q9NVT9 282 aa10.09□□□□□ -0.79
SKA3-206ENST00000475251 ARGLU1Q9NWB6 273 aaPredicted RBP10.09□□□□□ -0.79
SKA3-206ENST00000475251 OR14J1Q9UGF5 321 aa10.09□□□□□ -0.79
SKA3-206ENST00000475251 HILPDAQ9Y5L2 63 aa10.09□□□□□ -0.79
SKA3-206ENST00000475251 TMEM269A0A1B0GVZ9 245 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms