RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 DCAF12Q5T6F0 453 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 OLFML2AQ68BL7 652 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 GPRIN1Q7Z2K8 1008 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 PLXDC1Q8IUK5 500 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF547Q8IVP9 402 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 DCAF4L2Q8NA75 395 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 FER1L6-AS1Q8NA97 138 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 OR2T12Q8NG77 320 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 OR4D9Q8NGE8 314 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 FLYWCH2Q96CP2 140 aaKnown RBP4.25□□□□□ -1.73
NPHP3-206ENST00000474871 IP6K3Q96PC2 410 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 RHOJQ9H4E5 214 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 ELL3Q9HB65 397 aaPredicted RBP4.25□□□□□ -1.73
NPHP3-206ENST00000474871 SGK2Q9HBY8 427 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 UQCC1Q9NVA1 299 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 CKLFQ9UBR5 152 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 PDE10AQ9Y233 779 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 PCSK5Q92824 1860 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 RNF223E7ERA6 249 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 XRCC2O43543 280 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 PGLYRP1O75594 196 aaPredicted RBP4.25□□□□□ -1.73
NPHP3-206ENST00000474871 MT-CO2P00403 227 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 HGFP14210 728 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 AK4P27144 223 aaPredicted RBP4.25□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF84P51523 738 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 EBPQ15125 230 aaKnown RBP4.25□□□□□ -1.73
NPHP3-206ENST00000474871 GABRA6Q16445 453 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 GSG1Q2KHT4 349 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 UNQ5815/PRO19632Q6UWF5 114 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 Q6ZSR6 202 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 TMUB2Q71RG4 321 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 TMPRSS11BQ86T26 416 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 OR51G2Q8NGK0 314 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 LGALS14Q8TCE9 139 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 NDRG1Q92597 394 aaKnown RBP4.25□□□□□ -1.73
NPHP3-206ENST00000474871 KCTD15Q96SI1 283 aaPredicted RBP4.25□□□□□ -1.73
NPHP3-206ENST00000474871 OR8D2Q9GZM6 311 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 POMKQ9H5K3 350 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 RAXQ9Y2V3 346 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 ZFC3H1O60293 1989 aaKnown RBP4.25□□□□□ -1.73
NPHP3-206ENST00000474871 MYBPHLA2RUH7 354 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 MAS1P04201 325 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 FAM157CP0CG43 387 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF14P17017 642 aaPredicted RBP4.25□□□□□ -1.73
NPHP3-206ENST00000474871 ITGB7P26010 798 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 ADMP35318 185 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 RABGGTBP53611 331 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 EFNB1P98172 346 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 GAGE5Q13069 117 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 GAGE6Q13070 117 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 RBM39Q14498 530 aaKnown RBP4.25□□□□□ -1.73
NPHP3-206ENST00000474871 CLLU1OSQ5K130 101 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 PRAMEF17Q5VTA0 474 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 SMARCD3Q6STE5 483 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 GOLGA7Q7Z5G4 137 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF295-AS1Q8N0V1 137 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 CFAP52Q8N1V2 620 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 OR4D11Q8NGI4 311 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 OR2I1PQ8NGU4 316 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 FAM3CQ92520 227 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 HSPA12BQ96MM6 686 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 ASPNQ9BXN1 380 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 LPAR5Q9H1C0 372 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 FSCN3Q9NQT6 498 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 TMEM30AQ9NV96 361 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 THYN1Q9P016 225 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 CBLCQ9ULV8 474 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 V9GYS6 101 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 GOLGA4Q13439 2230 aaKnown RBP4.25□□□□□ -1.73
NPHP3-206ENST00000474871 PTPRDP23468 1912 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 LOC102723532A0A0G2JNH3 316 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 PNMA8CA0A1B0GUJ8 204 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF785A8K8V0 405 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 HMSDA8MTL9 139 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 METTL12A8MUP2 240 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 REM1O75628 298 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 FARS2O95363 451 aaKnown RBP4.25□□□□□ -1.73
NPHP3-206ENST00000474871 TIAF1O95411 115 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 KLF8O95600 359 aaPredicted RBP4.25□□□□□ -1.73
NPHP3-206ENST00000474871 OPN1SWP03999 348 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 CRYGDP07320 174 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 OR5G3P0C626 314 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 OR5AC1P0C628 307 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 IGLC1P0CG04 106 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF19P17023 458 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 F2RP25116 425 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 GSK3BP49841 420 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 PLP2Q04941 152 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 OR2F1Q13607 317 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 FHL3Q13643 280 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 MMDQ15546 238 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 CPSF6Q16630 551 aaKnown RBP eCLIP4.25□□□□□ -1.73
NPHP3-206ENST00000474871 PGBD5Q8N414 524 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 MUCL1Q96DR8 90 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 NUDT22Q9BRQ3 303 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 RBKSQ9H477 322 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 BPIFA1Q9NP55 256 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 FTSJ1Q9UET6 329 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 SCML2Q9UQR0 700 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 TTC3P53804 2025 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms