RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 SYT6Q5T7P8 510 aaPredicted RBP5.85□□□□□ -1.47
LIMD1-204ENST00000474665 HAGHLQ6PII5 290 aaPredicted RBP5.85□□□□□ -1.47
LIMD1-204ENST00000474665 CLEC2AQ6UVW9 174 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 FTMTQ8N4E7 242 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 TSPAN14Q8NG11 270 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 OR52N4Q8NGI2 321 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 OR13C9Q8NGT0 318 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 OR8S1Q8NH09 359 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 TRMT10AQ8TBZ6 339 aaKnown RBP5.85□□□□□ -1.47
LIMD1-204ENST00000474665 TSEN15Q8WW01 171 aaKnown RBP5.85□□□□□ -1.47
LIMD1-204ENST00000474665 PP6455Q8WZ26 134 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 AQP3Q92482 292 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 MUL1Q969V5 352 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 ERGIC1Q969X5 290 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 ZNF488Q96MN9 340 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 NR1H4Q96RI1 486 aaPredicted RBP5.85□□□□□ -1.47
LIMD1-204ENST00000474665 MICU1Q9BPX6 476 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 TMED9Q9BVK6 235 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 RTL8AQ9BWD3 113 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 REG4Q9BYZ8 158 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 COMMD4Q9H0A8 199 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 ZCCHC4Q9H5U6 513 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 PLEKHA1Q9HB21 404 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 TMEM165Q9HC07 324 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 MYOZ1Q9NP98 299 aaPredicted RBP5.85□□□□□ -1.47
LIMD1-204ENST00000474665 NOX4Q9NPH5 578 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 C1orf123Q9NWV4 160 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 NDUFB11Q9NX14 153 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 DHDHQ9UQ10 334 aa5.85□□□□□ -1.47
LIMD1-204ENST00000474665 NOP16Q9Y3C1 178 aaKnown RBP5.85□□□□□ -1.47
LIMD1-204ENST00000474665 KMT2CQ8NEZ4 4911 aaKnown RBP5.85□□□□□ -1.47
LIMD1-204ENST00000474665 IGHV3OR15-7A0A075B7D8 119 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 IGKV1-12A0A0C4DH73 117 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.84□□□□□ -1.47
LIMD1-204ENST00000474665 FAM230AA0A1W2PPH8 454 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 SHISA3A0PJX4 238 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 A6NLC8 198 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 TMEM210A6NLX4 147 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 SRRM5B3KS81 715 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 NDUFS8O00217 210 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 PPIHO43447 177 aaKnown RBP5.84□□□□□ -1.47
LIMD1-204ENST00000474665 AKR7A2O43488 359 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 SULT1B1O43704 296 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 TNFAIP8O95379 198 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 FSTL3O95633 263 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 IGKV1D-12P01611 117 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 TFF1P04155 84 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 RPSAP08865 295 aaKnown RBP5.84□□□□□ -1.47
LIMD1-204ENST00000474665 UCHL1P09936 223 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 CD37P11049 281 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 ZNF12P17014 697 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 ZNF20P17024 532 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 JUNBP17275 347 aaPredicted RBP5.84□□□□□ -1.47
LIMD1-204ENST00000474665 FSTP19883 344 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 AZGP1P25311 298 aaKnown RBP5.84□□□□□ -1.47
LIMD1-204ENST00000474665 HAAOP46952 286 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 FUT6P51993 359 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 ZP1P60852 638 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 ERVK11-1P61568 191 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 BTG1P62324 171 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 NEDD8Q15843 81 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 CD200R1LQ6Q8B3 271 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 KCTD8Q6ZWB6 473 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 C1QL2Q7Z5L3 287 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 LRRTM1Q86UE6 522 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 LRRC28Q86X40 367 aaPredicted RBP5.84□□□□□ -1.47
LIMD1-204ENST00000474665 FAM90A1Q86YD7 464 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 SERPINA12Q8IW75 414 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 SVOPQ8N4V2 548 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 DNAAF1Q8NEP3 725 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 LRRC29Q8WV35 223 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 UFD1Q92890 307 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 RFT1Q96AA3 541 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 GFI1Q99684 422 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 NARFLQ9H6Q4 476 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 FN3KRPQ9HA64 309 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 ABCB9Q9NP78 766 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 C14orf119Q9NWQ9 140 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 MTCH1Q9NZJ7 389 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 RNF7Q9UBF6 113 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 NPTNQ9Y639 398 aa5.84□□□□□ -1.47
LIMD1-204ENST00000474665 A0A087WXM4 84 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 A0A1B0GW55 424 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 CLDN25C9JDP6 229 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 F5H0A9 414 aaPredicted RBP5.83□□□□□ -1.48
LIMD1-204ENST00000474665 J3QT63 122 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 IFNL4K9M1U5 179 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 GABRPO00591 440 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 NOS1APO75052 506 aaPredicted RBP5.83□□□□□ -1.48
LIMD1-204ENST00000474665 GATBO75879 557 aaKnown RBP5.83□□□□□ -1.48
LIMD1-204ENST00000474665 ACAA1P09110 424 aaPredicted RBP5.83□□□□□ -1.48
LIMD1-204ENST00000474665 DUX4L2P0CJ85 424 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 DUX4L3P0CJ86 424 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 DUX4L4P0CJ87 422 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 DUX4L5P0CJ88 424 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 DUX4L6P0CJ89 424 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 DUX4L7P0CJ90 424 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 PGA5P0DJD9 388 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 SLC25A16P16260 332 aa5.83□□□□□ -1.48
LIMD1-204ENST00000474665 USF1P22415 310 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms