RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 IGHG2P01859 326 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 OR5AC1P0C628 307 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 RALBP11234 206 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 MSR1P21757 451 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 KLF3P57682 345 aaPredicted RBP1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 TAS2R60P59551 318 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 FMODQ06828 376 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 TNFRSF9Q07011 255 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 TPBGQ13641 420 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 ZNF141Q15928 474 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 GABRA6Q16445 453 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 CDNFQ49AH0 187 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 ZNF660Q6AZW8 331 aaPredicted RBP1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 ZNF470Q6ECI4 717 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 FAM231DQ6ZW35 169 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 FA2HQ7L5A8 372 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 ZDHHC22Q8N966 263 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 LRRC75AQ8NAA5 344 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 OR5T3Q8NGG3 340 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 OR4D6Q8NGJ1 314 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 OR52K2Q8NGK3 314 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 OR4C13Q8NGP0 309 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 OR5H2Q8NGV7 314 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 ACTL9Q8TC94 416 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 BAALCQ8WXS3 180 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 TMEM234Q8WY98 164 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 STACQ99469 402 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 ZNF649Q9BS31 505 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 MS4A8Q9BY19 250 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 ARV1Q9H2C2 271 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 CYP3A43Q9HB55 503 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 FAM60AQ9NP50 221 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 TMEM100Q9NV29 134 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 ZNF608Q9ULD9 1512 aaPredicted RBP1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 TRIP11Q15643 1979 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 SIGLEC1Q9BZZ2 1709 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 RPRD2Q5VT52 1461 aaKnown RBP1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 IGKV1-6A0A0C4DH72 117 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 TRDMT1O14717 391 aaKnown RBP1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 AQP9O43315 295 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 NDUFS5O43920 106 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 PTTG1O95997 202 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 OXTP01178 125 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 GCGP01275 180 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 FGF4P08620 206 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 PTHLHP12272 177 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 PMCHP20382 165 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 SLC6A1P30531 599 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 ARR3P36575 388 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 RPL10AP62906 217 aaKnown RBP1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 RAB11BQ15907 218 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 IDNKQ5T6J7 187 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 KDM4DQ6B0I6 523 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 UGT2A3Q6UWM9 527 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 SPNS3Q6ZMD2 512 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 TRAM1L1Q8N609 369 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 CYB561A3Q8NBI2 242 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 LY6G5BQ8NDX9 201 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 OR2M7Q8NG81 312 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 OR8K3Q8NH51 312 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 ISG20Q96AZ6 181 aaKnown RBP1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 TSNAXQ99598 290 aaKnown RBP1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 THTPAQ9BU02 230 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 IL22Q9GZX6 179 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 NAA50Q9GZZ1 169 aaKnown RBP1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 BLZF1Q9H2G9 400 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 VSIRQ9H7M9 311 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 RHOFQ9HBH0 211 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 TAC3Q9UHF0 121 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 PRO0628Q9UI54 55 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 VAX2Q9UIW0 290 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 NAGKQ9UJ70 344 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 SLC7A11Q9UPY5 501 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 SAMHD1Q9Y3Z3 626 aaKnown RBP1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 SBNO1A3KN83 1393 aa1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 AQRO60306 1485 aaKnown RBP eCLIP1.42□□□□□ -2.18
ECHDC1-213ENST00000474240 ELP1O95163 1332 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 TSPOAP1O95153 1857 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 THADAQ6YHU6 1953 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 IGHV2OR16-5A0A0B4J2B6 119 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 IGLL5B9A064 214 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 ZBTB5O15062 677 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 SLC31A1O15431 190 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 SLC37A4O43826 429 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 PSIP1O75475 530 aaKnown RBP1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 IGKV1-39P01597 117 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 IGKV1D-39P04432 117 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 HOXB8P17481 243 aaPredicted RBP1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 CCT6AP40227 531 aaKnown RBP1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 RPS5P46782 204 aaKnown RBP1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 LGALS7P47929 136 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 PSMC5P62195 406 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 PAFAH1B2P68402 229 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 STK38Q15208 465 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 ELOCQ15369 112 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 TOMM34Q15785 309 aaPredicted RBP1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 TTC32Q5I0X7 151 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 LDLRAD2Q5SZI1 272 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 SLC35D2Q76EJ3 337 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 OR2W3Q7Z3T1 314 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms