RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 HSPE1-MOB4S4R3N1 261 aa11.81□□□□□ -0.52
VAMP4-203ENST00000474047 C22orf46C9J442 243 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 CCDC159P0C7I6 412 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 IL13RA1P78552 427 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 SRSF2Q01130 221 aaKnown RBP11.8□□□□□ -0.52
VAMP4-203ENST00000474047 PAX2Q02962 417 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 UBE2V2Q15819 145 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 ATPAF1Q5TC12 328 aaPredicted RBP11.8□□□□□ -0.52
VAMP4-203ENST00000474047 STUMQ69YW2 141 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 RBMS3Q6XE24 437 aaKnown RBP11.8□□□□□ -0.52
VAMP4-203ENST00000474047 ANGPTL5Q86XS5 388 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 OR5AK2Q8NH90 309 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 C22orf15Q8WYQ4 148 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 H1FXQ92522 213 aaKnown RBP11.8□□□□□ -0.52
VAMP4-203ENST00000474047 SUCNR1Q9BXA5 334 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 MS4A7Q9GZW8 240 aaPredicted RBP11.8□□□□□ -0.52
VAMP4-203ENST00000474047 A0A0A6YYJ9 748 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 TRBV2A0A0J9YWF9 115 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 SYNGR1O43759 233 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 PLATP00750 562 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 NDUFB7P17568 137 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 CAPZA1P52907 286 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 ATP1B3P54709 279 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 FGF12P61328 243 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 C11orf91Q3C1V1 193 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 METTL11BQ5VVY1 283 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 POC1AQ8NBT0 407 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 RNF166Q96A37 237 aaPredicted RBP11.8□□□□□ -0.52
VAMP4-203ENST00000474047 ZNF488Q96MN9 340 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 JMJD8Q96S16 334 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 PCGF1Q9BSM1 259 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 NEK6Q9HC98 313 aa11.8□□□□□ -0.52
VAMP4-203ENST00000474047 NKX1-2Q9UD57 310 aaPredicted RBP11.8□□□□□ -0.52
VAMP4-203ENST00000474047 IGHV3OR16-10A0A075B7F0 116 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 A0A1B0GW55 424 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 TMEM212A6NML5 194 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 OR4C45A6NMZ5 311 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 GPR37O15354 613 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 TOX4O94842 621 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 INMTO95050 263 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 CYB5AP00167 134 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 ACAA1P09110 424 aaPredicted RBP11.79□□□□□ -0.52
VAMP4-203ENST00000474047 DUX4L2P0CJ85 424 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 DUX4L3P0CJ86 424 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 DUX4L4P0CJ87 422 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 DUX4L5P0CJ88 424 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 DUX4L6P0CJ89 424 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 DUX4L7P0CJ90 424 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 PPIAL4GP0DN37 164 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 PRKACBP22694 351 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 TGM4P49221 684 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 RBP2P50120 134 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 ETV1P50549 477 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 DUX4L9Q6RFH8 374 aaPredicted RBP11.79□□□□□ -0.52
VAMP4-203ENST00000474047 ACP7Q6ZNF0 438 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 BATF2Q8N1L9 274 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 ANGPTL6Q8NI99 470 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 TSEN15Q8WW01 171 aaKnown RBP11.79□□□□□ -0.52
VAMP4-203ENST00000474047 ADAT3Q96EY9 351 aaPredicted RBP11.79□□□□□ -0.52
VAMP4-203ENST00000474047 TMEM80Q96HE8 168 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 SLC6A7Q99884 636 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 PKIBQ9C010 78 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 DUX4Q9UBX2 424 aa11.79□□□□□ -0.52
VAMP4-203ENST00000474047 SLC25A10Q9UBX3 287 aaPredicted RBP11.79□□□□□ -0.52
VAMP4-203ENST00000474047 CAB39Q9Y376 341 aaPredicted RBP11.79□□□□□ -0.52
VAMP4-203ENST00000474047 EXOSC1Q9Y3B2 195 aaKnown RBP11.79□□□□□ -0.52
VAMP4-203ENST00000474047 ANK3Q12955 4377 aaKnown RBP11.78□□□□□ -0.52
VAMP4-203ENST00000474047 ZNF879B4DU55 563 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 TFF1P04155 84 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 GNAO1P09471 354 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 LIMS3P0CW19 117 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 LIMS4P0CW20 117 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 PGA5P0DJD9 388 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 PSG2P11465 335 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 ATF1P18846 271 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 MTCP1P56278 107 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 IL24Q13007 206 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 ZNF788Q6ZQV5 615 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 CALHM1Q8IU99 346 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 TMEM185AQ8NFB2 350 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 UPRTQ96BW1 309 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 GAFA1Q96PS6 74 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 JAM3Q9BX67 310 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 VCX3BQ9H321 246 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 CNTD2Q9H8S5 307 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 ONECUT1Q9UBC0 465 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 RPUSD1Q9UJJ7 312 aaKnown RBP11.78□□□□□ -0.52
VAMP4-203ENST00000474047 DIMT1Q9UNQ2 313 aaKnown RBP11.78□□□□□ -0.52
VAMP4-203ENST00000474047 DHDHQ9UQ10 334 aa11.78□□□□□ -0.52
VAMP4-203ENST00000474047 TRAV40A0A0B4J280 105 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 EFCAB10A6NFE3 127 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 RFPL4AA6NLU0 287 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 E9PI62 339 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 RFPL4AL1F8VTS6 287 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 SLC1A7O00341 560 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 SIGLEC5O15389 551 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 FSHBP01225 129 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 ARF6P62330 175 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 GPR157Q5UAW9 335 aa11.77□□□□□ -0.52
VAMP4-203ENST00000474047 UTS2BQ765I0 119 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms