RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 MTCP1P56278 107 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 WNT4P56705 351 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 SEC61A1P61619 476 aaKnown RBP11.48□□□□□ -0.57
USF1-205ENST00000473969 HOXA4Q00056 320 aaPredicted RBP11.48□□□□□ -0.57
USF1-205ENST00000473969 SCGB2A2Q13296 93 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 SMIM21Q3B7S5 101 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 WDR25Q64LD2 544 aaPredicted RBP11.48□□□□□ -0.57
USF1-205ENST00000473969 LHFPL2Q6ZUX7 228 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 IL17RELQ6ZVW7 336 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 ANGPTL5Q86XS5 388 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 DNAAF1Q8NEP3 725 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 OR51A4Q8NGJ6 313 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 OR10AC1Q8NH08 325 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 SPSB1Q96BD6 273 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 SMIM19Q96E16 107 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 MND1Q9BWT6 205 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 PKIBQ9C010 78 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 ZCCHC4Q9H5U6 513 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 C7orf69Q9H7B7 122 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 SNTG1Q9NSN8 517 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 NLKQ9UBE8 527 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 BLOC1S6Q9UL45 172 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 ZNF281Q9Y2X9 895 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 PCDHGB5Q9Y5G0 923 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 ZANQ9Y493 2812 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 YLPM1P49750 1951 aaKnown RBP11.47□□□□□ -0.57
USF1-205ENST00000473969 LOC105371242A0A075B767 164 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 OGG1O15527 345 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 NDUFB3O43676 98 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 NXPH2O95156 264 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 PLATP00750 562 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 HCKP08631 526 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 FAM157CP0CG43 387 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 HOXB4P17483 251 aaPredicted RBP11.47□□□□□ -0.57
USF1-205ENST00000473969 AZGP1P25311 298 aaKnown RBP11.47□□□□□ -0.57
USF1-205ENST00000473969 SOX2P48431 317 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 IL24Q13007 206 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 LRRC10Q5BKY1 277 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 MKXQ8IYA7 352 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 NANOGP1Q8N7R0 232 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 POC1AQ8NBT0 407 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 OR5T2Q8NGG2 359 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 OR13C9Q8NGT0 318 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 MED30Q96HR3 178 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 OPALINQ96PE5 141 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 CCL13Q99616 98 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 DNTTIP1Q9H147 329 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 WDR13Q9H1Z4 485 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 FKBP14Q9NWM8 211 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 KAAG1Q9UBP8 84 aa11.47□□□□□ -0.57
USF1-205ENST00000473969 POLR3KQ9Y2Y1 108 aaPredicted RBP11.47□□□□□ -0.57
USF1-205ENST00000473969 OR2AT4A6NND4 320 aa11.46□□□□□ -0.57
USF1-205ENST00000473969 SYNGR1O43759 233 aa11.46□□□□□ -0.57
USF1-205ENST00000473969 RAB3AP20336 220 aa11.46□□□□□ -0.57
USF1-205ENST00000473969 EEF1B2P24534 225 aaKnown RBP11.46□□□□□ -0.57
USF1-205ENST00000473969 POU3F4P49335 361 aa11.46□□□□□ -0.57
USF1-205ENST00000473969 RBM48Q5RL73 367 aaKnown RBP11.46□□□□□ -0.57
USF1-205ENST00000473969 RNLSQ5VYX0 342 aa11.46□□□□□ -0.57
USF1-205ENST00000473969 FIP1L1Q6UN15 594 aaKnown RBP11.46□□□□□ -0.57
USF1-205ENST00000473969 RAB40AQ8WXH6 277 aa11.46□□□□□ -0.57
USF1-205ENST00000473969 ST8SIA4Q92187 359 aa11.46□□□□□ -0.57
USF1-205ENST00000473969 GHSRQ92847 366 aa11.46□□□□□ -0.57
USF1-205ENST00000473969 SEH1LQ96EE3 360 aa11.46□□□□□ -0.57
USF1-205ENST00000473969 CPNE2Q96FN4 548 aaPredicted RBP11.46□□□□□ -0.57
USF1-205ENST00000473969 CEP19Q96LK0 163 aa11.46□□□□□ -0.57
USF1-205ENST00000473969 ZNF184Q99676 751 aaPredicted RBP11.46□□□□□ -0.57
USF1-205ENST00000473969 NUDT16L1Q9BRJ7 211 aaKnown RBP11.46□□□□□ -0.57
USF1-205ENST00000473969 CCDC90BQ9GZT6 254 aa11.46□□□□□ -0.57
USF1-205ENST00000473969 AUP1Q9Y679 476 aa11.46□□□□□ -0.57
USF1-205ENST00000473969 IGHV2-70DA0A0C4DH43 119 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 PNMA8CA0A1B0GUJ8 204 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 KIAA1324LA8MWY0 1029 aaPredicted RBP11.45□□□□□ -0.58
USF1-205ENST00000473969 TRAPPC2LH3BP13 241 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.45□□□□□ -0.58
USF1-205ENST00000473969 DVL1O14640 695 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 TNFRSF13BO14836 293 aaPredicted RBP11.45□□□□□ -0.58
USF1-205ENST00000473969 GPR37O15354 613 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 RGS10O43665 173 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 SULT1B1O43704 296 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 ENSAO43768 121 aaKnown RBP11.45□□□□□ -0.58
USF1-205ENST00000473969 NOS1APO75052 506 aaPredicted RBP11.45□□□□□ -0.58
USF1-205ENST00000473969 ECDO95905 644 aaPredicted RBP11.45□□□□□ -0.58
USF1-205ENST00000473969 MT-ND2P03891 347 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 ACAA1P09110 424 aaPredicted RBP11.45□□□□□ -0.58
USF1-205ENST00000473969 PGA5P0DJD9 388 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 MPZP25189 248 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 CAPZA1P52907 286 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 PPP3R1P63098 170 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 IL13RA1P78552 427 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 IKZF1Q13422 519 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 C11orf91Q3C1V1 193 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 YIF1BQ5BJH7 314 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 ATPAF1Q5TC12 328 aaPredicted RBP11.45□□□□□ -0.58
USF1-205ENST00000473969 STUMQ69YW2 141 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 XAF1Q6GPH4 301 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 ZNF841Q6ZN19 808 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 ACP7Q6ZNF0 438 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 SLC25A26Q70HW3 274 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 CALHM1Q8IU99 346 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 Q8IYB0 196 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms