RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 PEA15Q15121 130 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 GFRALQ6UXV0 394 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 ZNF813Q6ZN06 617 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 SYT9Q86SS6 491 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 TMEM185AQ8NFB2 350 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 OR2G2Q8NGZ5 317 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 AKR7LQ8NHP1 331 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 ASB13Q8WXK3 278 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 RGP1Q92546 391 aaPredicted RBP12.89□□□□□ -0.35
LMNA-213ENST00000473598 SHANK1Q9Y566 2161 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 INTS1Q8N201 2190 aaKnown RBP12.89□□□□□ -0.35
LMNA-213ENST00000473598 NUDT19A8MXV4 375 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 UBL3O95164 117 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 PNPP00491 289 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 IFNA10P01566 189 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 MGMTP16455 207 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 ATF1P18846 271 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 SRMP19623 302 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 VAMP1P23763 118 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 DCTDP32321 178 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 GMFBP60983 142 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 RAB2AP61019 212 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 FOXF2Q12947 444 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 SNTB2Q13425 540 aaKnown RBP12.89□□□□□ -0.35
LMNA-213ENST00000473598 KLHL24Q6TFL4 600 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 GLDNQ6ZMI3 551 aaPredicted RBP12.89□□□□□ -0.35
LMNA-213ENST00000473598 REC114Q7Z4M0 266 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 PRSS35Q8N3Z0 413 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 CNEP1R1Q8N9A8 125 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 TRMT10AQ8TBZ6 339 aaKnown RBP12.89□□□□□ -0.35
LMNA-213ENST00000473598 C14orf144Q96I85 54 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 NOX4Q9NPH5 578 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 ZNF629Q9UEG4 869 aaPredicted RBP12.89□□□□□ -0.35
LMNA-213ENST00000473598 PRRG2O14669 202 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 FARS2O95363 451 aaKnown RBP12.88□□□□□ -0.35
LMNA-213ENST00000473598 IL5P05113 134 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 CBR1P16152 277 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 CCR9P51686 369 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 IGFBP7Q16270 282 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 C9orf135Q5VTT2 229 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 ZNF561Q8N587 486 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 C15orf54Q8N8G6 183 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 PHYHIPLQ96FC7 376 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 C4orf45Q96LM5 186 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 OCSTAMPQ9BR26 566 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 CHMP1AQ9HD42 196 aaPredicted RBP12.88□□□□□ -0.35
LMNA-213ENST00000473598 CA10Q9NS85 328 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 ABRACLQ9P1F3 81 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 ZNF835Q9Y2P0 537 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 R4GMQ9 66 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 OR4C45A6NMZ5 311 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 COLCA2A8K830 154 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 TXNL1O43396 289 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 CREBL2O60519 120 aaPredicted RBP12.88□□□□□ -0.35
LMNA-213ENST00000473598 MT-ND4P03905 459 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 CRHP06850 196 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 PSMB1P20618 241 aaKnown RBP12.88□□□□□ -0.35
LMNA-213ENST00000473598 TIMP3P35625 211 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 RBP2P50120 134 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 MFGE8Q08431 387 aaPredicted RBP12.88□□□□□ -0.35
LMNA-213ENST00000473598 FABP9Q0Z7S8 132 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 TAF13Q15543 124 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 WDR38Q5JTN6 314 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 ZNF626Q68DY1 528 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 VWA1Q6PCB0 445 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 SLC16A14Q7RTX9 510 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 CATSPERDQ86XM0 798 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 RPRMLQ8N4K4 120 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 OR5AK2Q8NH90 309 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 DERL3Q96Q80 235 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 SLC5A6Q9Y289 635 aa12.88□□□□□ -0.35
LMNA-213ENST00000473598 AK6Q9Y3D8 172 aaKnown RBP12.88□□□□□ -0.35
LMNA-213ENST00000473598 TMEM269A0A1B0GVZ9 245 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 ANKRD61A6NGH8 418 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 ACOD1A6NK06 481 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 TMEM212A6NML5 194 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 CTDSPLO15194 276 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 TNFSF13O75888 250 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 SPDEFO95238 335 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 CNOT4O95628 575 aaKnown RBP12.87□□□□□ -0.35
LMNA-213ENST00000473598 COX5BP10606 129 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 ZNF32P17041 273 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 NDUFB7P17568 137 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 ADCYAP1P18509 176 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 RAB4AP20338 218 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 HSD11B1P28845 292 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 KIR3DL2P43630 455 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 HTR5AP47898 357 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 MMP16P51512 607 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 PCBD1P61457 104 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 GRB2P62993 217 aaKnown RBP12.87□□□□□ -0.35
LMNA-213ENST00000473598 DOLPP1Q86YN1 238 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 RELL2Q8NC24 303 aaPredicted RBP12.87□□□□□ -0.35
LMNA-213ENST00000473598 C2orf88Q9BSF0 95 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 COMMD4Q9H0A8 199 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 PLSCR4Q9NRQ2 329 aa12.87□□□□□ -0.35
LMNA-213ENST00000473598 IL18BPO95998 194 aa12.86□□□□□ -0.35
LMNA-213ENST00000473598 IL2RAP01589 272 aa12.86□□□□□ -0.35
LMNA-213ENST00000473598 IGHV2-5P01817 119 aa12.86□□□□□ -0.35
LMNA-213ENST00000473598 ITGA5P08648 1049 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms