RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 IFT46Q9NQC8 304 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 ATPIF1Q9UII2 106 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 ZNF222Q9UK12 451 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 SLC7A11Q9UPY5 501 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 ARID1AO14497 2285 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 IGKV1D-8A0A087WSZ0 117 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 OR14I1A6ND48 311 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 MBD3L4A6NDZ8 208 aaPredicted RBP5.35□□□□□ -1.55
CLK1-210ENST00000473565 MBD3L3A6NE82 208 aaPredicted RBP5.35□□□□□ -1.55
CLK1-210ENST00000473565 NAP1L6A6NFF2 107 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 MBD3L5A6NJ08 208 aaPredicted RBP5.35□□□□□ -1.55
CLK1-210ENST00000473565 ZNF732B4DXR9 585 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 MSTNO14793 375 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 SSNA1O43805 119 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 ICMTO60725 284 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 ALX3O95076 343 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 ZNF205O95201 554 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 CRYABP02511 175 aaKnown RBP5.35□□□□□ -1.55
CLK1-210ENST00000473565 CSTBP04080 98 aaKnown RBP5.35□□□□□ -1.55
CLK1-210ENST00000473565 ZNF735P0CB33 412 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 UBBP0CG47 229 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 COX5AP20674 150 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 PRKACBP22694 351 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 DUSP1P28562 367 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 HAAOP46952 286 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 FUT6P51993 359 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 CAPZA1P52907 286 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 ATP1B3P54709 279 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 GMFBP60983 142 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 PDZK1IP1Q13113 114 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 KCNJ8Q15842 424 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 ZFP69Q49AA0 526 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 ZNF474Q6S9Z5 364 aaPredicted RBP5.35□□□□□ -1.55
CLK1-210ENST00000473565 LHFPL2Q6ZUX7 228 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 CDH26Q8IXH8 852 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 OR56B1Q8NGI3 324 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 MBD3L2Q8NHZ7 208 aaPredicted RBP5.35□□□□□ -1.55
CLK1-210ENST00000473565 FBXW5Q969U6 566 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 MICU1Q9BPX6 476 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 FAAP24Q9BTP7 215 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 PECRQ9BY49 303 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 METTL9Q9H1A3 318 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 SCPEP1Q9HB40 452 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 CDH20Q9HBT6 801 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 PLSCR4Q9NRQ2 329 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 PLSCR3Q9NRY6 295 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 COPZ2Q9P299 210 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 CACNA1AO00555 2505 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 LRBAP50851 2863 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 FOXI3A8MTJ6 420 aaPredicted RBP5.35□□□□□ -1.55
CLK1-210ENST00000473565 SULT1C2O00338 296 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 SDCBPO00560 298 aaPredicted RBP5.35□□□□□ -1.55
CLK1-210ENST00000473565 RRP8O43159 456 aaKnown RBP5.35□□□□□ -1.55
CLK1-210ENST00000473565 SYNGR1O43759 233 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 SMPD2O60906 423 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 TPPPO94811 219 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 CHRM2P08172 466 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 MELTFP08582 738 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 BCL3P20749 454 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 BMP5P22003 454 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 ALDH3B1P43353 468 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 TBC1D28Q2M2D7 210 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 C1orf185Q5T7R7 199 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 OR2A2Q6IF42 318 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 C22orf34Q6ZV56 151 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 C5orf24Q7Z6I8 188 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 ZDHHC23Q8IYP9 409 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 FAM89BQ8N5H3 189 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 TMEM229BQ8NBD8 167 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 UXS1Q8NBZ7 420 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 CCDC54Q8NEL0 328 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 SLC25A40Q8TBP6 338 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 MRGPRFQ96AM1 343 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 Q96M66 194 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 ZNF701Q9NV72 531 aaPredicted RBP5.35□□□□□ -1.55
CLK1-210ENST00000473565 ASF1BQ9NVP2 202 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 TAS2R8Q9NYW2 309 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 ZNF69Q9UC07 566 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 ZNF391Q9UJN7 358 aa5.35□□□□□ -1.55
CLK1-210ENST00000473565 PKD1L2Q7Z442 2459 aa5.34□□□□□ -1.55
CLK1-210ENST00000473565 FIGNL2A6NMB9 653 aa5.34□□□□□ -1.55
CLK1-210ENST00000473565 CECR9P0C854 216 aa5.34□□□□□ -1.55
CLK1-210ENST00000473565 CPT2P23786 658 aa5.34□□□□□ -1.55
CLK1-210ENST00000473565 HOXC12P31275 282 aa5.34□□□□□ -1.55
CLK1-210ENST00000473565 OPRM1P35372 400 aa5.34□□□□□ -1.55
CLK1-210ENST00000473565 FAUP35544 74 aaKnown RBP5.34□□□□□ -1.55
CLK1-210ENST00000473565 MPV17P39210 176 aa5.34□□□□□ -1.55
CLK1-210ENST00000473565 PPP1CBP62140 327 aa5.34□□□□□ -1.55
CLK1-210ENST00000473565 DAZAP2Q15038 168 aaPredicted RBP5.34□□□□□ -1.55
CLK1-210ENST00000473565 MICBQ29980 383 aa5.34□□□□□ -1.55
CLK1-210ENST00000473565 RNASE10Q5GAN6 216 aaKnown RBP5.34□□□□□ -1.55
CLK1-210ENST00000473565 HAGHLQ6PII5 290 aaPredicted RBP5.34□□□□□ -1.55
CLK1-210ENST00000473565 C17orf78Q8N4C9 275 aa5.34□□□□□ -1.55
CLK1-210ENST00000473565 OR1J1Q8NGS3 322 aa5.34□□□□□ -1.55
CLK1-210ENST00000473565 OR13C8Q8NGS7 320 aa5.34□□□□□ -1.55
CLK1-210ENST00000473565 SNRNP40Q96DI7 357 aaKnown RBP5.34□□□□□ -1.55
CLK1-210ENST00000473565 SULT4A1Q9BR01 284 aa5.34□□□□□ -1.55
CLK1-210ENST00000473565 CHIAQ9BZP6 476 aa5.34□□□□□ -1.55
CLK1-210ENST00000473565 MOV10Q9HCE1 1003 aaKnown RBP5.34□□□□□ -1.55
CLK1-210ENST00000473565 PLEKHJ1Q9NW61 149 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms