RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 KPTNQ9Y664 436 aa3.8□□□□□ -1.8
SEC22A-204ENST00000473494 BAZ2BQ9UIF8 2168 aaKnown RBP3.8□□□□□ -1.8
SEC22A-204ENST00000473494 CEP290O15078 2479 aa3.8□□□□□ -1.8
SEC22A-204ENST00000473494 CCDC171Q6TFL3 1326 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 RAB19A4D1S5 217 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 F8VZ95 297 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 ENTPD5O75356 428 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 DCNP07585 359 aaKnown RBP3.79□□□□□ -1.8
SEC22A-204ENST00000473494 TACSTD2P09758 323 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 SSTR5P35346 364 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 CFHR2P36980 270 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 HCAR3P49019 387 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 P2RX1P51575 399 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 BLVRAP53004 296 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 PSMD4P55036 377 aaKnown RBP3.79□□□□□ -1.8
SEC22A-204ENST00000473494 VSX2P58304 361 aaPredicted RBP3.79□□□□□ -1.8
SEC22A-204ENST00000473494 SKP1P63208 163 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 LOXL1Q08397 574 aaPredicted RBP3.79□□□□□ -1.8
SEC22A-204ENST00000473494 SYCNQ0VAF6 134 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 ALX1Q15699 326 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 PSG3Q16557 428 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 RPEL1Q2QD12 228 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 ORMDL2Q53FV1 153 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 Q5W150 140 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 ZNF470Q6ECI4 717 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 PTRHD1Q6GMV3 140 aaKnown RBP3.79□□□□□ -1.8
SEC22A-204ENST00000473494 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
SEC22A-204ENST00000473494 NTM-AS1Q6ZSK4 140 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 MRPL55Q7Z7F7 128 aaKnown RBP3.79□□□□□ -1.8
SEC22A-204ENST00000473494 OR7G1Q8NGA0 311 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 OR6Q1Q8NGQ2 317 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 OR5W2Q8NH69 310 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 LRRC29Q8WV35 223 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 C9orf72Q96LT7 481 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 GLT1D1Q96MS3 346 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 NSRP1Q9H0G5 558 aaKnown RBP3.79□□□□□ -1.8
SEC22A-204ENST00000473494 GOLPH3Q9H4A6 298 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 HMG20AQ9NP66 347 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 IFNKQ9P0W0 207 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 POFUT2Q9Y2G5 429 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 CBY1Q9Y3M2 126 aa3.79□□□□□ -1.8
SEC22A-204ENST00000473494 PLIN4Q96Q06 1357 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 A0A0U1RQV1 116 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 DNASE2O00115 360 aaPredicted RBP3.78□□□□□ -1.8
SEC22A-204ENST00000473494 GABRPO00591 440 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 ZBTB5O15062 677 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 GCM2O75603 506 aaPredicted RBP3.78□□□□□ -1.8
SEC22A-204ENST00000473494 SMC2O95347 1197 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 CTSLP07711 333 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 GOLGA8HP0CJ92 632 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 HOXB8P17481 243 aaPredicted RBP3.78□□□□□ -1.8
SEC22A-204ENST00000473494 IGFBP3P17936 291 aaPredicted RBP3.78□□□□□ -1.8
SEC22A-204ENST00000473494 PSMC3P17980 439 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 PGAM1P18669 254 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 TCN2P20062 427 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 IL12BP29460 328 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 RFC3P40938 356 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 FABP6P51161 128 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 ZNF121P58317 390 aaPredicted RBP3.78□□□□□ -1.8
SEC22A-204ENST00000473494 PFN3P60673 137 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 LCN2P80188 198 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 STX3Q13277 289 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 ULK3Q6PHR2 472 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 TMEM205Q6UW68 189 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 HORMAD1Q86X24 394 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 PGAM4Q8N0Y7 254 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 KRT222Q8N1A0 295 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 C17orf78Q8N4C9 275 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 CBR4Q8N4T8 237 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 COX18Q8N8Q8 333 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 PIFOQ8TCI5 191 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 PIH1D2Q8WWB5 315 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 CSPG4P5Q96PW8 444 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 ALS2CR12Q96Q35 445 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 NDEL1Q9GZM8 345 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 UCK1Q9HA47 277 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 MS4A12Q9NXJ0 267 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 SLC39A1Q9NY26 324 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 ZNF229Q9UJW7 825 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 YARS2Q9Y2Z4 477 aaKnown RBP3.78□□□□□ -1.8
SEC22A-204ENST00000473494 ZNF236Q9UL36 1845 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 LRRC37A2A6NM11 1700 aa3.78□□□□□ -1.8
SEC22A-204ENST00000473494 RANBP2P49792 3224 aaKnown RBP3.78□□□□□ -1.81
SEC22A-204ENST00000473494 MYH6P13533 1939 aa3.78□□□□□ -1.81
SEC22A-204ENST00000473494 RAD50Q92878 1312 aa3.77□□□□□ -1.81
SEC22A-204ENST00000473494 SCN1AP35498 2009 aa3.77□□□□□ -1.81
SEC22A-204ENST00000473494 SZT2Q5T011 3432 aa3.77□□□□□ -1.81
SEC22A-204ENST00000473494 A0A1W2PNU3 283 aaPredicted RBP3.77□□□□□ -1.81
SEC22A-204ENST00000473494 H7C1H1 209 aa3.77□□□□□ -1.81
SEC22A-204ENST00000473494 ERI3O43414 337 aaKnown RBP3.77□□□□□ -1.81
SEC22A-204ENST00000473494 SCN2BO60939 215 aa3.77□□□□□ -1.81
SEC22A-204ENST00000473494 CYBAP13498 195 aa3.77□□□□□ -1.81
SEC22A-204ENST00000473494 DTYMKP23919 212 aa3.77□□□□□ -1.81
SEC22A-204ENST00000473494 PTGES3Q15185 160 aaKnown RBP3.77□□□□□ -1.81
SEC22A-204ENST00000473494 ZNF691Q5VV52 312 aa3.77□□□□□ -1.81
SEC22A-204ENST00000473494 PID1Q7Z2X4 250 aa3.77□□□□□ -1.81
SEC22A-204ENST00000473494 WDR86Q86TI4 376 aa3.77□□□□□ -1.81
SEC22A-204ENST00000473494 OR4D6Q8NGJ1 314 aa3.77□□□□□ -1.81
SEC22A-204ENST00000473494 RGP1Q92546 391 aaPredicted RBP3.77□□□□□ -1.81
SEC22A-204ENST00000473494 LRRC45Q96CN5 670 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms