RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 METTL7AQ9H8H3 244 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 REEP1Q9H902 201 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 NMNAT1Q9HAN9 279 aaPredicted RBP3.86□□□□□ -1.79
CCDC39-202ENST00000471307 NTN4Q9HB63 628 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 TMEM27Q9HBJ8 222 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 SH2D2AQ9NP31 389 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 ACER3Q9NUN7 267 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 RDH8Q9NYR8 311 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 KLRF1Q9NZS2 232 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 RIMS3Q9UJD0 308 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 CLEC4AQ9UMR7 237 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 FOXJ3Q9UPW0 622 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 CHCHD2Q9Y6H1 151 aaPredicted RBP3.86□□□□□ -1.79
CCDC39-202ENST00000471307 FAM240BA0A1B0GVZ2 78 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 TRAPPC13A5PLN9 417 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 G3V2T6 193 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 H0YJX3 145 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 K7ENP7 123 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 TNFRSF11BO00300 401 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF208O43345 1280 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 TPST2O60704 377 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 E2F6O75461 281 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 CBR3O75828 277 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 GADD45GO95257 159 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 GKN3PP0CG01 181 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 PNMTP11086 282 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 ANXA8P13928 327 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 CNR1P21554 472 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 FKBP2P26885 142 aaKnown RBP3.85□□□□□ -1.79
CCDC39-202ENST00000471307 IFNGR2P38484 337 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 VHLP40337 213 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 PTGDSP41222 190 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 TAS2R41P59536 307 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 OC90Q02509 493 aaPredicted RBP3.85□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF117Q03924 483 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 SRSF6Q13247 344 aaKnown RBP3.85□□□□□ -1.79
CCDC39-202ENST00000471307 TRAM2Q15035 370 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 OR1Q1Q15612 314 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 TRIP10Q15642 601 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 CD226Q15762 336 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 MICAQ29983 383 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 EXOC3L2Q2M3D2 409 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 ANKRD55Q3KP44 614 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 OGFRL1Q5TC84 451 aaPredicted RBP3.85□□□□□ -1.79
CCDC39-202ENST00000471307 METAP1DQ6UB28 335 aaPredicted RBP3.85□□□□□ -1.79
CCDC39-202ENST00000471307 CBLN3Q6UW01 205 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 IGFL2Q6UWQ7 119 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 IGFL3Q6UXB1 125 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 P4HA3Q7Z4N8 544 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 COMTD1Q86VU5 262 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 UBQLNLQ8IYU4 475 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 OFCC1Q8IZS5 231 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 CYP4Z2PQ8N1L4 340 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 UBE2J2Q8N2K1 259 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 PACRGLQ8N7B6 248 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 GPR119Q8TDV5 335 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 ADAMTS16Q8TE57 1224 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 TMEM234Q8WY98 164 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 SLC38A4Q969I6 547 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 SLC41A3Q96GZ6 507 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 WFDC6Q9BQY6 131 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 NDUFAF3Q9BU61 184 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 OSBPL11Q9BXB4 747 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 VCXQ9H320 206 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 PTGES2Q9H7Z7 377 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 C12orf10Q9HB07 376 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 RPS6KB2Q9UBS0 482 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 SAMHD1Q9Y3Z3 626 aaKnown RBP3.85□□□□□ -1.79
CCDC39-202ENST00000471307 WIF1Q9Y5W5 379 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 CPAMD8Q8IZJ3 1885 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 NCOR2Q9Y618 2525 aa3.85□□□□□ -1.79
CCDC39-202ENST00000471307 A0A087WUJ7 227 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 A0A087WUU8 490 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 A0A0B4J2E0 115 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 A0A1B0GWA3 101 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 A0A1B0GX12 115 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 SH3PXD2BA1X283 911 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 ARRDC5A6NEK1 342 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 CPSF4LA6NMK7 179 aaKnown RBP3.84□□□□□ -1.79
CCDC39-202ENST00000471307 MKRN2OSH3BPM6 223 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 KLRC4-KLRK1H3BQV0 150 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 H3BTX0 84 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 CHP2O43745 196 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 CDC40O60508 579 aaKnown RBP eCLIP3.84□□□□□ -1.79
CCDC39-202ENST00000471307 BCAS1O75363 584 aaPredicted RBP3.84□□□□□ -1.79
CCDC39-202ENST00000471307 TRIM3O75382 744 aaPredicted RBP3.84□□□□□ -1.79
CCDC39-202ENST00000471307 SCGNO76038 276 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 DIRAS1O95057 198 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 CCNB2O95067 398 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 LYPD3O95274 346 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 NUDT14O95848 222 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 IGF2P01344 180 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 FCGR3AP08637 254 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 FREM3P0C091 2139 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 CCL3P10147 92 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF44P15621 663 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 GALP22466 123 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 CXCR1P25024 350 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 EIF1P41567 113 aaKnown RBP3.84□□□□□ -1.79
CCDC39-202ENST00000471307 RBM34P42696 430 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms