RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 TMEM107Q6UX40 140 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 TFAP2EQ6VUC0 442 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 NPSR1Q6W5P4 371 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 GDPGP1Q6ZNW5 385 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 BHLHA15Q7RTS1 189 aaPredicted RBP2.06□□□□□ -2.08
UBXN4-206ENST00000470687 ZNF550Q7Z398 422 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 PRR22Q8IZ63 422 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 LYG1Q8N1E2 194 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 MUC15Q8N387 334 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 CCNYL1Q8N7R7 359 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 COX18Q8N8Q8 333 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 ZNRF1Q8ND25 227 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 OR4F17Q8NGA8 305 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 OR56B2PQ8NGI1 322 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 GPR119Q8TDV5 335 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 GTF3AQ92664 365 aaKnown RBP2.06□□□□□ -2.08
UBXN4-206ENST00000470687 NRGNQ92686 78 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 EMG1Q92979 244 aaKnown RBP2.06□□□□□ -2.08
UBXN4-206ENST00000470687 TESCQ96BS2 214 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 S100PBPQ96BU1 408 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 DDIT4LQ96D03 193 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 ZMYND19Q96E35 227 aaPredicted RBP2.06□□□□□ -2.08
UBXN4-206ENST00000470687 FCRL1Q96LA6 429 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 C9orf85Q96MD7 179 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 TRNT1Q96Q11 434 aaKnown RBP2.06□□□□□ -2.08
UBXN4-206ENST00000470687 OR4F4Q96R69 305 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 HBEGFQ99075 208 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 SDF2Q99470 211 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 KCNS3Q9BQ31 491 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 TMEM43Q9BTV4 400 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 OCR1Q9BZK8 76 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 LINC00470Q9BZP3 86 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 OPN3Q9H1Y3 402 aaPredicted RBP2.06□□□□□ -2.08
UBXN4-206ENST00000470687 JPT2Q9H910 190 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 GNB4Q9HAV0 340 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 C12orf10Q9HB07 376 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 AMBNQ9NP70 447 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 ACER3Q9NUN7 267 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 GNG12Q9UBI6 72 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 CHRNA9Q9UGM1 479 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 ZNF225Q9UK10 706 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 NOSIPQ9Y314 301 aaKnown RBP2.06□□□□□ -2.08
UBXN4-206ENST00000470687 IFT52Q9Y366 437 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 N6AMT1Q9Y5N5 214 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 DNAJC15Q9Y5T4 150 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 NCKAP5O14513 1909 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 NUP214P35658 2090 aaPredicted RBP2.06□□□□□ -2.08
UBXN4-206ENST00000470687 FBN2P35556 2912 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 ADGRG4Q8IZF6 3080 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 CSPG4Q6UVK1 2322 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 ACANP16112 2415 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 MTORP42345 2549 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 SETD2Q9BYW2 2564 aaPredicted RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 RAI1Q7Z5J4 1906 aaPredicted RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 OTOGQ6ZRI0 2925 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 IGLV4-3A0A075B6K6 122 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 ARPC4-TTLL3A0A0A6YYG9 625 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 TEX48A0A1B0GUV7 120 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 METTL21EPA6NDL7 271 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 DPRXA6NFQ7 191 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 CCT8L1PA6NM43 557 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 TRPC5OSA6NMA1 111 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 CENPBD1B2RD01 187 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 B4DSR2 109 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 RPL36A-HNRNPH2H7BZ11 118 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 ABCD4O14678 606 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 TNFSF11O14788 317 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 LSM1O15116 133 aaKnown RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 SCAMP2O15127 329 aaKnown RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 ARPC3O15145 178 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 TM9SF1O15321 606 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 CLOCKO15516 846 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 CXCL13O43927 109 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 PLIN3O60664 434 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 SNNO75324 88 aaPredicted RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 SERPINB7O75635 380 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 PIAS1O75925 651 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 CSTAP01040 98 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 IGHG1P01857 330 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 OPN1LWP04000 364 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 DBIP07108 87 aaKnown RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 TROVE2P10155 538 aaKnown RBP eCLIP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 PNMTP11086 282 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 NR2C1P13056 603 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 BCL3P20749 454 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 PPIBP23284 216 aaKnown RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 CXCR1P25024 350 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 LOXP28300 417 aaPredicted RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 ALDH3A1P30838 453 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 RFX3P48380 749 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 PPOXP50336 477 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 RPL14P50914 215 aaKnown RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 FABP6P51161 128 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 POLR2HP52434 150 aaKnown RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 NDUFV3P56181 108 aaKnown RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 UBE2NP61088 152 aaKnown RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 LMO4P61968 165 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 RPS23P62266 143 aaKnown RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 SNRPD2P62316 118 aaKnown RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 BSPH1Q075Z2 132 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms