RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 MEP1BQ16820 701 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 MESTQ5EB52 335 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 C1orf185Q5T7R7 199 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 C9orf66Q5T8R8 295 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 OGFRL1Q5TC84 451 aaPredicted RBP3.14□□□□□ -1.91
COL9A1-206ENST00000470652 KDM4DQ6B0I6 523 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 SLC27A4Q6P1M0 643 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 C1orf94Q6P1W5 598 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 UGT2A3Q6UWM9 527 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 IZUMO2Q6UXV1 221 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF620Q6ZNG0 422 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 TMPPEQ6ZT21 453 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 RELL2Q8NC24 303 aaPredicted RBP3.14□□□□□ -1.91
COL9A1-206ENST00000470652 SDR9C7Q8NEX9 313 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 OR9K2Q8NGE7 335 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 OR4K13Q8NH42 304 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 PIGXQ8TBF5 258 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 FAM57AQ8TBR7 257 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 GNPDA2Q8TDQ7 276 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 DNAJA4Q8WW22 397 aaPredicted RBP3.14□□□□□ -1.91
COL9A1-206ENST00000470652 APH1BQ8WW43 257 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 CYGBQ8WWM9 190 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 RASSF5Q8WWW0 418 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 TMEM234Q8WY98 164 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 CENPNQ96H22 339 aaPredicted RBP3.14□□□□□ -1.91
COL9A1-206ENST00000470652 ALKBH3Q96Q83 286 aaPredicted RBP3.14□□□□□ -1.91
COL9A1-206ENST00000470652 IL4I1Q96RQ9 567 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 NMNAT3Q96T66 252 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 TMEM43Q9BTV4 400 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 TAPBPLQ9BX59 468 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 TSSK6Q9BXA6 273 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 GABARAPL1Q9H0R8 117 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 POLR2J3Q9H1A7 115 aaKnown RBP3.14□□□□□ -1.91
COL9A1-206ENST00000470652 C5orf66Q9H5L9 145 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 RERGLQ9H628 205 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 NOX3Q9HBY0 568 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF226Q9NYT6 803 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 TAS2R16Q9NYV7 291 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 DNAJC27Q9NZQ0 273 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 C6orf203Q9P0P8 240 aaPredicted RBP3.14□□□□□ -1.91
COL9A1-206ENST00000470652 STX18Q9P2W9 335 aaKnown RBP3.14□□□□□ -1.91
COL9A1-206ENST00000470652 TMCC3Q9ULS5 477 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 SIGLEC7Q9Y286 467 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF835Q9Y2P0 537 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 KLHDC2Q9Y2U9 406 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 AP4B1Q9Y6B7 739 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 DOPEY2Q9Y3R5 2298 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 UBR5O95071 2799 aaPredicted RBP3.13□□□□□ -1.91
COL9A1-206ENST00000470652 HEATR1Q9H583 2144 aaKnown RBP3.13□□□□□ -1.91
COL9A1-206ENST00000470652 A0A1W2PNV4 684 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 C5orf63A6NC05 138 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 TVP23AA6NH52 213 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 H3BN98 237 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 M0R3G1 203 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 CCL21O00585 134 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 BHLHE40O14503 412 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 PHOX2AO14813 284 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 CASQ2O14958 399 aaPredicted RBP3.13□□□□□ -1.91
COL9A1-206ENST00000470652 MLNRO43193 412 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 LRRTM2O43300 516 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF208O43345 1280 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 HCN1O60741 890 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 TNFSF13O75888 250 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 ACTL6AO96019 429 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 MRPL3P09001 348 aaKnown RBP3.13□□□□□ -1.91
COL9A1-206ENST00000470652 TSPAN19P0C672 248 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 THRBP10828 461 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 UQCRBP14927 111 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 CPN1P15169 458 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 CTLA4P16410 223 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 ELK4P28324 431 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 AGTR1P30556 359 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 FMO3P31513 532 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 RPL4P36578 427 aaKnown RBP3.13□□□□□ -1.91
COL9A1-206ENST00000470652 ACVR1BP36896 505 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 EIF1P41567 113 aaKnown RBP3.13□□□□□ -1.91
COL9A1-206ENST00000470652 RBM34P42696 430 aaKnown RBP3.13□□□□□ -1.91
COL9A1-206ENST00000470652 PSPHP78330 225 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 ADARB1P78563 741 aaKnown RBP3.13□□□□□ -1.91
COL9A1-206ENST00000470652 TSPAN31Q12999 210 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 KRR1Q13601 381 aaKnown RBP3.13□□□□□ -1.91
COL9A1-206ENST00000470652 CRMP1Q14194 572 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 GINS1Q14691 196 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 SLC17A1Q14916 467 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 PTGES3Q15185 160 aaKnown RBP3.13□□□□□ -1.91
COL9A1-206ENST00000470652 GUSBP1Q15486 140 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 ACKR1Q16570 336 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 PGGHGQ32M88 737 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 ZBED5Q49AG3 693 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 NHSL2Q5HYW2 709 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 TSPO2Q5TGU0 170 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 ZFP1Q6P2D0 407 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 NIPAL3Q6P499 406 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 PLBD1Q6P4A8 553 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 CASP12Q6UXS9 341 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 RFPL4BQ6ZWI9 263 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 Q71RC1 249 aaPredicted RBP3.13□□□□□ -1.91
COL9A1-206ENST00000470652 SLC35D2Q76EJ3 337 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 FAM122BQ7Z309 247 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 P4HA3Q7Z4N8 544 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms