RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 PPIAL4DF5H284 164 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 ACAA1P09110 424 aaPredicted RBP12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 PPIAL4FP0DN26 164 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 IGFBP3P17936 291 aaPredicted RBP12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 RAB3AP20336 220 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 PPP3R1P63098 170 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 SSX1Q16384 188 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 ZNF404Q494X3 552 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 ARMCX4Q5H9R4 360 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 AVPI1Q5T686 147 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 HAGHLQ6PII5 290 aaPredicted RBP12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 LRRC28Q86X40 367 aaPredicted RBP12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 CALHM1Q8IU99 346 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 SPICQ8N5J4 248 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 TSPAN14Q8NG11 270 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 TRMT10AQ8TBZ6 339 aaKnown RBP12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 NPRL2Q8WTW4 380 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 LRRC29Q8WV35 223 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 PHYHIPQ92561 330 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 CPNE2Q96FN4 548 aaPredicted RBP12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 TMED9Q9BVK6 235 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 TAS2R4Q9NYW5 299 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 CKLFQ9UBR5 152 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 SF3B6Q9Y3B4 125 aaKnown RBP12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 PPIAL4AQ9Y536 164 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 NBEAL1Q6ZS30 2694 aa12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 SMAD7O15105 426 aaKnown RBP12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 NOS1APO75052 506 aaPredicted RBP12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 ALDOBP05062 364 aa12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 OCMP0CE72 109 aaPredicted RBP12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 CPT2P23786 658 aa12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 ATP1B3P54709 279 aa12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 KCNJ8Q15842 424 aa12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 ACSM3Q53FZ2 586 aa12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 SYT6Q5T7P8 510 aaPredicted RBP12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 TEX36Q5VZQ5 186 aa12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 UNQ9370/PRO34162Q6UXP9 181 aa12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 POC1AQ8NBT0 407 aa12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 OR51A2Q8NGJ7 313 aa12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 CLDND2Q8NHS1 167 aa12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 ZNF671Q8TAW3 534 aa12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 C12orf43Q96C57 262 aaKnown RBP12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 TMEM138Q9NPI0 162 aa12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 FOXJ3Q9UPW0 622 aa12.52□□□□□ -0.41
CDC42SE1-203ENST00000470278 OOEPA6NGQ2 149 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 LGALS8O00214 317 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 CCRL2O00421 344 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 WNT9BO14905 357 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 PIN1P1O15428 100 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 RHBDL1O75783 438 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 INMTO95050 263 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 PGA5P0DJD9 388 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 MUC1P15941 1255 aaPredicted RBP12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 EGR1P18146 543 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 GALP22466 123 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 PSMB9P28065 219 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 RBMXP38159 391 aaKnown RBP12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 MTCP1P56278 107 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 RPS25P62851 125 aaKnown RBP12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 CRIP3Q6Q6R5 217 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 CD200R1LQ6Q8B3 271 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 MUL1Q969V5 352 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 C1orf159Q96HA4 380 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 GAL3ST1Q99999 423 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 NRIP2Q9BQI9 281 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 METTL17Q9H7H0 456 aaPredicted RBP12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 TMEM165Q9HC07 324 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 NOX4Q9NPH5 578 aa12.51□□□□□ -0.41
CDC42SE1-203ENST00000470278 TRAV8-7A0A075B6U6 113 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 TRAV38-1A0A0B4J264 116 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 ISPDA4D126 451 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 MAGEB3O15480 346 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 NDUFA2O43678 99 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 RGS9O75916 674 aaPredicted RBP12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 IGHV2-5P01817 119 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 HCKP08631 526 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 UCHL1P09936 223 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 BDKRB2P30411 391 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 CD80P33681 288 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 ERVK11-1P61568 191 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 LMO4P61968 165 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 INSL4Q14641 139 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 KISS1Q15726 138 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 TMEM249Q2WGJ8 235 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 FAM201AQ5SY85 155 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 TMEM91Q6ZNR0 172 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 DCDC5Q6ZRR9 648 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 ANGPTL5Q86XS5 388 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 FAM90A1Q86YD7 464 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 NKAIN3Q8N8D7 197 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 TMEM203Q969S6 136 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 RAB39BQ96DA2 213 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 ZNF665Q9H7R5 613 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 HES4Q9HCC6 221 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 VCX3AQ9NNX9 186 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 RASL12Q9NYN1 266 aa12.5□□□□□ -0.41
CDC42SE1-203ENST00000470278 ANK2Q01484 3957 aa12.49□□□□□ -0.41
CDC42SE1-203ENST00000470278 CEACAM18A8MTB9 384 aa12.49□□□□□ -0.41
CDC42SE1-203ENST00000470278 F5H0A9 414 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms