RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 Q6ZSR6 202 aa2.12□□□□□ -2.07
BRCA2-202ENST00000470094 BHLHA15Q7RTS1 189 aaPredicted RBP2.12□□□□□ -2.07
BRCA2-202ENST00000470094 MDP1Q86V88 176 aa2.12□□□□□ -2.07
BRCA2-202ENST00000470094 ZCCHC24Q8N2G6 241 aaKnown RBP2.12□□□□□ -2.07
BRCA2-202ENST00000470094 ATPAF2Q8N5M1 289 aa2.12□□□□□ -2.07
BRCA2-202ENST00000470094 OR4M1Q8NGD0 313 aa2.12□□□□□ -2.07
BRCA2-202ENST00000470094 OR1L1Q8NH94 360 aa2.12□□□□□ -2.07
BRCA2-202ENST00000470094 CIRBP-AS1Q8TBR5 109 aa2.12□□□□□ -2.07
BRCA2-202ENST00000470094 DCAKDQ8WVC6 231 aa2.12□□□□□ -2.07
BRCA2-202ENST00000470094 TMEM159Q96B96 161 aa2.12□□□□□ -2.07
BRCA2-202ENST00000470094 S100PBPQ96BU1 408 aa2.12□□□□□ -2.07
BRCA2-202ENST00000470094 C18orf15Q96N68 181 aa2.12□□□□□ -2.07
BRCA2-202ENST00000470094 SHCBP1LQ9BZQ2 653 aa2.12□□□□□ -2.07
BRCA2-202ENST00000470094 PORCNQ9H237 461 aa2.12□□□□□ -2.07
BRCA2-202ENST00000470094 WDR55Q9H6Y2 383 aaPredicted RBP2.12□□□□□ -2.07
BRCA2-202ENST00000470094 SIRT7Q9NRC8 400 aa2.12□□□□□ -2.07
BRCA2-202ENST00000470094 MAT2BQ9NZL9 334 aa2.12□□□□□ -2.07
BRCA2-202ENST00000470094 STX18Q9P2W9 335 aaKnown RBP2.12□□□□□ -2.07
BRCA2-202ENST00000470094 ENPP5Q9UJA9 477 aa2.12□□□□□ -2.07
BRCA2-202ENST00000470094 AK9Q5TCS8 1911 aa2.12□□□□□ -2.07
BRCA2-202ENST00000470094 USP42Q9H9J4 1324 aaKnown RBP2.12□□□□□ -2.07
BRCA2-202ENST00000470094 IGSF9BQ9UPX0 1349 aa2.12□□□□□ -2.07
BRCA2-202ENST00000470094 SLC5A10A0PJK1 596 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 COLCA2A8K830 154 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 F8VP50 259 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 RBFOX2O43251 390 aaKnown RBP eCLIP2.11□□□□□ -2.07
BRCA2-202ENST00000470094 EIF1BO60739 113 aaKnown RBP2.11□□□□□ -2.07
BRCA2-202ENST00000470094 CCDC22O60826 627 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 VAMP5O95183 116 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 IGLV2-8P01709 118 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 HLA-DQA1P01909 254 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 ZNF688P0C7X2 276 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 ZNF806P0C7X5 589 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 MUC1P15941 1255 aaPredicted RBP2.11□□□□□ -2.07
BRCA2-202ENST00000470094 SYT1P21579 422 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 ME2P23368 584 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 PSMB5P28074 263 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 EIF1P41567 113 aaKnown RBP2.11□□□□□ -2.07
BRCA2-202ENST00000470094 HTR2BP41595 481 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 DSTNP60981 165 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 TSPAN5P62079 268 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 IL5RAQ01344 420 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 STX4Q12846 297 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 SLAMF1Q13291 335 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 TEX30Q5JUR7 227 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 IDNKQ5T6J7 187 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 HHATQ5VTY9 493 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 ZNF470Q6ECI4 717 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 GUSBP11Q6P575 273 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 HMGN2P46Q86SG4 172 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 NELFCDQ8IXH7 590 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 SELENOHQ8IZQ5 122 aaKnown RBP2.11□□□□□ -2.07
BRCA2-202ENST00000470094 GAPTQ8N292 157 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 TMEM256Q8N2U0 113 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 TTLQ8NG68 377 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 OR2Y1Q8NGV0 311 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 RBMXL1Q96E39 390 aaKnown RBP2.11□□□□□ -2.07
BRCA2-202ENST00000470094 SNF8Q96H20 258 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 ARL5BQ96KC2 179 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 ALS2CR12Q96Q35 445 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 CYTH2Q99418 400 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 TIMM29Q9BSF4 260 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 ZNF2Q9BSG1 426 aaPredicted RBP2.11□□□□□ -2.07
BRCA2-202ENST00000470094 TMED9Q9BVK6 235 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 NUDT9Q9BW91 350 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 ANGPTL4Q9BY76 406 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 SLC38A1Q9H2H9 487 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 LRRC42Q9Y546 428 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 ORC6Q9Y5N6 252 aa2.11□□□□□ -2.07
BRCA2-202ENST00000470094 IGHV3-49A0A0A0MS15 119 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 ZNF233A6NK53 670 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 NDUFS5O43920 106 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 GATBO75879 557 aaKnown RBP2.1□□□□□ -2.07
BRCA2-202ENST00000470094 BRI3O95415 125 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 LDOC1O95751 146 aaPredicted RBP2.1□□□□□ -2.07
BRCA2-202ENST00000470094 IGKV1D-16P01601 117 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 IGLV3-25P01717 112 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 ADRA2AP08913 450 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 GIMD1P0DJR0 217 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 ZNF14P17017 642 aaPredicted RBP2.1□□□□□ -2.07
BRCA2-202ENST00000470094 PSMB6P28072 239 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 UGT2B10P36537 528 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 OPRK1P41145 380 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 CRATP43155 626 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 CXCL12P48061 93 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 PSMB2P49721 201 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 OR2B6P58173 313 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 COTL1Q14019 142 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 ZBTB6Q15916 424 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 TTC32Q5I0X7 151 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 ZNF684Q5T5D7 378 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 CLEC19AQ6UXS0 136 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 Q6ZT83 130 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 AHSA2Q719I0 299 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 UBALD2Q8IYN6 164 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 SPICQ8N5J4 248 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 LRRC52Q8N7C0 313 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 OR7G1Q8NGA0 311 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 OR13G1Q8NGZ3 307 aa2.1□□□□□ -2.07
BRCA2-202ENST00000470094 OR51Q1Q8NH59 317 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms