RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 GNRHR2Q96P88 292 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 MICU1Q9BPX6 476 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 ADAT1Q9BUB4 502 aaKnown RBP11.9□□□□□ -0.5
BRCA1-209ENST00000470026 SF3B5Q9BWJ5 86 aaKnown RBP11.9□□□□□ -0.5
BRCA1-209ENST00000470026 RBM24Q9BX46 236 aaKnown RBP11.9□□□□□ -0.5
BRCA1-209ENST00000470026 RHOFQ9HBH0 211 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 TAF9BQ9HBM6 251 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 ZNF701Q9NV72 531 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-209ENST00000470026 PLEKHJ1Q9NW61 149 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 PLEK2Q9NYT0 353 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 PLA2G2EQ9NZK7 142 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 IGHV3-15A0A0B4J1V0 119 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 A0A0J9YW62 118 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 H7C2Y5 167 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 SYNGR3O43761 229 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 LRP3O75074 770 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 FCGR3AP08637 254 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 MUC1P15941 1255 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-209ENST00000470026 LPAR6P43657 344 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 S100A10P60903 97 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 RAC1P63000 192 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 RAB35Q15286 201 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 TMEM88Q6PEY1 159 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 HAGHLQ6PII5 290 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-209ENST00000470026 SGPP2Q8IWX5 399 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 GPR137CQ8N3F9 429 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 FNDC9Q8TBE3 224 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 HDHD3Q9BSH5 251 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-209ENST00000470026 ULBP2Q9BZM5 246 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 METTL9Q9H1A3 318 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 ARV1Q9H2C2 271 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 LIME1Q9H400 295 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 OR2S2Q9NQN1 319 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 PARP11Q9NR21 331 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 GSKIPQ9P0R6 139 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 AMDHD2Q9Y303 409 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 POMT1Q9Y6A1 747 aa11.9□□□□□ -0.5
BRCA1-209ENST00000470026 SFTPBP07988 381 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 RPL12P30050 165 aaKnown RBP11.89□□□□□ -0.51
BRCA1-209ENST00000470026 NPBWR1P48145 328 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 RAET1LQ5VY80 246 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 GGNBP1Q5YKI7 109 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 TMEM42Q69YG0 159 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 OR2A2Q6IF42 318 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 GALNTL5Q7Z4T8 443 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 CBLN2Q8IUK8 224 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 NAT6Q93015 286 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 WNT2BQ93097 391 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 ZNF837Q96EG3 531 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-209ENST00000470026 GALNT14Q96FL9 552 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 PRRX2Q99811 253 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 TREM1Q9NP99 234 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 GPR173Q9NS66 373 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 ZNF175Q9Y473 711 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 IGKV1-27A0A075B6S5 117 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 FAM157AC9JC47 383 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 KLF7O75840 302 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-209ENST00000470026 JTBO76095 146 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 CST2P09228 141 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 OR5H8P0DN80 308 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 GABRR1P24046 479 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 CHATP28329 748 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 MTCP1P56278 107 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 RAB11FIP2Q7L804 512 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 FAM219AQ8IW50 185 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 LRTM2Q8N967 370 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 SRXN1Q9BYN0 137 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 HRH4Q9H3N8 390 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 TMEM231Q9H6L2 316 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 ELL3Q9HB65 397 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-209ENST00000470026 PADI1Q9ULC6 663 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 HS3ST3B1Q9Y662 390 aa11.89□□□□□ -0.51
BRCA1-209ENST00000470026 K7EPK0 472 aa11.88□□□□□ -0.51
BRCA1-209ENST00000470026 FBXO24O75426 580 aa11.88□□□□□ -0.51
BRCA1-209ENST00000470026 TMEM225BP0DP42 221 aa11.88□□□□□ -0.51
BRCA1-209ENST00000470026 RCC1P18754 421 aaPredicted RBP11.88□□□□□ -0.51
BRCA1-209ENST00000470026 SSR4P51571 173 aa11.88□□□□□ -0.51
BRCA1-209ENST00000470026 B3GALT5-AS1P59052 145 aa11.88□□□□□ -0.51
BRCA1-209ENST00000470026 FAM3AP98173 230 aa11.88□□□□□ -0.51
BRCA1-209ENST00000470026 HGFACQ04756 655 aa11.88□□□□□ -0.51
BRCA1-209ENST00000470026 LYSMD4Q5XG99 296 aa11.88□□□□□ -0.51
BRCA1-209ENST00000470026 ZNF100Q8IYN0 542 aa11.88□□□□□ -0.51
BRCA1-209ENST00000470026 FAM71E2Q8N5Q1 922 aa11.88□□□□□ -0.51
BRCA1-209ENST00000470026 MRPL24Q96A35 216 aaKnown RBP11.88□□□□□ -0.51
BRCA1-209ENST00000470026 CPNE2Q96FN4 548 aaPredicted RBP11.88□□□□□ -0.51
BRCA1-209ENST00000470026 PLEKHA2Q9HB19 425 aa11.88□□□□□ -0.51
BRCA1-209ENST00000470026 RYDENQ9NUL5 291 aaKnown RBP11.88□□□□□ -0.51
BRCA1-209ENST00000470026 FBXL17Q9UF56 701 aa11.88□□□□□ -0.51
BRCA1-209ENST00000470026 AK3Q9UIJ7 227 aa11.88□□□□□ -0.51
BRCA1-209ENST00000470026 TNRC6BQ9UPQ9 1833 aaKnown RBP11.88□□□□□ -0.51
BRCA1-209ENST00000470026 SDK1Q7Z5N4 2213 aa11.88□□□□□ -0.51
BRCA1-209ENST00000470026 OR6C6A6NF89 314 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 RNASEK-C17orf49H0YIS7 233 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 SGCEO43556 437 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 CBR3O75828 277 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 IFNA21P01568 189 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 PVALBP20472 110 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-209ENST00000470026 FCGR2CP31995 323 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 RFC3P40938 356 aa11.87□□□□□ -0.51
BRCA1-209ENST00000470026 MLF1P58340 268 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms