RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 C7orf66A4D0T2 115 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 P2RY10O00398 339 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 ARSBP15848 533 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 CCL1P22362 96 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 HTR2CP28335 458 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 CDAP32320 146 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 POU3F4P49335 361 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 SRP9P49458 86 aaKnown RBP15.05■□□□□ -0
MRPL28-208ENST00000469744 ZNF84P51523 738 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 SSBP1Q04837 148 aaKnown RBP15.05■□□□□ -0
MRPL28-208ENST00000469744 OLFML2AQ68BL7 652 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 BTN2A1Q7KYR7 527 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 GLCCI1Q86VQ1 547 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 PRIMA1Q86XR5 153 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 SERPINA12Q8IW75 414 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 CDH26Q8IXH8 852 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 IZUMO1Q8IYV9 350 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 LRRC18Q8N456 261 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 CCDC54Q8NEL0 328 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 GJC3Q8NFK1 279 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 OR51D1Q8NGF3 324 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 OR52I2Q8NH67 350 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 YAE1D1Q9NRH1 226 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 FZR1Q9UM11 496 aa15.05■□□□□ -0
MRPL28-208ENST00000469744 A0A1B0GVI7 797 aa15.04■□□□□ -0
MRPL28-208ENST00000469744 ANKRD20A5PA0PJZ0 165 aa15.04■□□□□ -0
MRPL28-208ENST00000469744 SYT7O43581 403 aa15.04■□□□□ -0
MRPL28-208ENST00000469744 CD5LO43866 347 aa15.04■□□□□ -0
MRPL28-208ENST00000469744 TCRBP04435 133 aa15.04■□□□□ -0
MRPL28-208ENST00000469744 CCL2P13500 99 aa15.04■□□□□ -0
MRPL28-208ENST00000469744 SLC25A16P16260 332 aa15.04■□□□□ -0
MRPL28-208ENST00000469744 PPOXP50336 477 aa15.04■□□□□ -0
MRPL28-208ENST00000469744 ZNF529Q6P280 563 aa15.04■□□□□ -0
MRPL28-208ENST00000469744 TCTE3Q8IZS6 198 aa15.04■□□□□ -0
MRPL28-208ENST00000469744 UBASH3BQ8TF42 649 aa15.04■□□□□ -0
MRPL28-208ENST00000469744 MRPL37Q9BZE1 423 aaKnown RBP15.04■□□□□ -0
MRPL28-208ENST00000469744 NEK6Q9HC98 313 aa15.04■□□□□ -0
MRPL28-208ENST00000469744 DYNLRB1Q9NP97 96 aa15.04■□□□□ -0
MRPL28-208ENST00000469744 TAS2R8Q9NYW2 309 aa15.04■□□□□ -0
MRPL28-208ENST00000469744 ASH2LQ9UBL3 628 aa15.04■□□□□ -0
MRPL28-208ENST00000469744 A0A1B0GTI1 187 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 GGT3PA6NGU5 568 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 SULT1C2O00338 296 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 LDLRAD4O15165 306 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 FARS2O95363 451 aaKnown RBP15.03■□□□□ -0
MRPL28-208ENST00000469744 APOC1P02654 83 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 SERPINA5P05154 406 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 ERCC1P07992 297 aaPredicted RBP15.03■□□□□ -0
MRPL28-208ENST00000469744 RAB6AP20340 208 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 BDKRB2P30411 391 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 PDLIM4P50479 330 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 RRAS2P62070 204 aaPredicted RBP15.03■□□□□ -0
MRPL28-208ENST00000469744 MRPS34P82930 218 aaKnown RBP15.03■□□□□ -0
MRPL28-208ENST00000469744 GALK2Q01415 458 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 KCNJ8Q15842 424 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 TMEM249Q2WGJ8 235 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 SLC16A14Q7RTX9 510 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 PAQR4Q8N4S7 273 aaPredicted RBP15.03■□□□□ -0
MRPL28-208ENST00000469744 NABP1Q96AH0 204 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 SYT3Q9BQG1 590 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 UQCC2Q9BRT2 126 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 OR51B6Q9H340 312 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 AUNIPQ9H7T9 357 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 HRASLSQ9HDD0 168 aa15.03■□□□□ -0
MRPL28-208ENST00000469744 PAIP2BQ9ULR5 123 aaKnown RBP15.03■□□□□ -0
MRPL28-208ENST00000469744 ANK3Q12955 4377 aaKnown RBP15.03■□□□□ -0
MRPL28-208ENST00000469744 TMEM272A0A1B0GTI8 110 aa15.02■□□□□ -0
MRPL28-208ENST00000469744 VSTM5A8MXK1 200 aa15.02■□□□□ -0
MRPL28-208ENST00000469744 H3BSH0 61 aa15.02■□□□□ -0
MRPL28-208ENST00000469744 LOXL1Q08397 574 aaPredicted RBP15.02■□□□□ -0
MRPL28-208ENST00000469744 ENDOGQ14249 297 aaKnown RBP15.02■□□□□ -0
MRPL28-208ENST00000469744 SGCAQ16586 387 aa15.02■□□□□ -0
MRPL28-208ENST00000469744 ZFP69Q49AA0 526 aa15.02■□□□□ -0
MRPL28-208ENST00000469744 FAM27BQ5VT28 67 aa15.02■□□□□ -0
MRPL28-208ENST00000469744 LRP11Q86VZ4 500 aa15.02■□□□□ -0
MRPL28-208ENST00000469744 SLC30A7Q8NEW0 376 aa15.02■□□□□ -0
MRPL28-208ENST00000469744 OR1M1Q8NGA1 313 aa15.02■□□□□ -0
MRPL28-208ENST00000469744 OR5D14Q8NGL3 314 aa15.02■□□□□ -0
MRPL28-208ENST00000469744 OR56B4Q8NH76 319 aa15.02■□□□□ -0
MRPL28-208ENST00000469744 MRPL24Q96A35 216 aaKnown RBP15.02■□□□□ -0
MRPL28-208ENST00000469744 FGGYQ96C11 551 aa15.02■□□□□ -0
MRPL28-208ENST00000469744 ZNF416Q9BWM5 594 aa15.02■□□□□ -0
MRPL28-208ENST00000469744 TMEM138Q9NPI0 162 aa15.02■□□□□ -0
MRPL28-208ENST00000469744 RHBDD3Q9Y3P4 386 aa15.02■□□□□ -0
MRPL28-208ENST00000469744 SPEF1Q9Y4P9 236 aa15.02■□□□□ -0
MRPL28-208ENST00000469744 KIAA1324LA8MWY0 1029 aaPredicted RBP15.01□□□□□ -0.01
MRPL28-208ENST00000469744 CRLF1O75462 422 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 USF1P22415 310 aaPredicted RBP15.01□□□□□ -0.01
MRPL28-208ENST00000469744 GIFP27352 417 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 CX3CR1P49238 355 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 ZNF121P58317 390 aaPredicted RBP15.01□□□□□ -0.01
MRPL28-208ENST00000469744 RNASE12Q5GAN4 147 aaKnown RBP15.01□□□□□ -0.01
MRPL28-208ENST00000469744 GLYATL3Q5SZD4 288 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 TMEM53Q6P2H8 277 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 Q6ZSR3 168 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 PGAP1Q75T13 922 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 DOK3Q7L591 496 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 PLPP7Q8NBV4 271 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 PHF21AQ96BD5 680 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 PIMREGQ9BSJ6 248 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms