RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CDK5Q00535 292 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 SCGB2A2Q13296 93 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 TMED1Q13445 227 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 FHL1Q13642 323 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 ENDOGQ14249 297 aaKnown RBP5.27□□□□□ -1.57
PTCD3-208ENST00000469585 TRIP10Q15642 601 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 MEP1BQ16820 701 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 PNLIPRP3Q17RR3 467 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 ALKBH6Q3KRA9 238 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 SPATA46Q5T0L3 261 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 NXNL2Q5VZ03 156 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 KDM4DQ6B0I6 523 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 CORO6Q6QEF8 472 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 NHLRC1Q6VVB1 395 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 ZNF771Q7L3S4 317 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-208ENST00000469585 DPY19L4Q7Z388 723 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 BIVMQ86UB2 503 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 TEX29Q8N6K0 151 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 TCEANCQ8N8B7 351 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 OR51L1Q8NGJ5 315 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 OR11L1Q8NGX0 322 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 OR13G1Q8NGZ3 307 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 OR8S1Q8NH09 359 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 RDH5Q92781 318 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 RAB1CQ92928 201 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 ITFG2Q969R8 447 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 ORAI1Q96D31 301 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 SLAMF6Q96DU3 332 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 ZMYND19Q96E35 227 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-208ENST00000469585 C18orf12Q96KH6 178 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 POM121L2Q96KW2 1035 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 RDH12Q96NR8 316 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 IL4I1Q96RQ9 567 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 PLA2G12AQ9BZM1 189 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 OR2J1Q9GZK6 312 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 CXXC4Q9H2H0 198 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 RGCCQ9H4X1 137 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 DCLRE1BQ9H816 532 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 NEK6Q9HC98 313 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 VNN3Q9NY84 501 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 CYB5R1Q9UHQ9 305 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 FZR1Q9UM11 496 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 COMMD3-BMI1R4GMX3 469 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 SPENQ96T58 3664 aaKnown RBP5.27□□□□□ -1.57
PTCD3-208ENST00000469585 IGLV5-37A0A075B6J1 123 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 IGKV1D-43A0A0B4J1Z2 117 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 IGHV1-69-2A0A0G2JMI3 117 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 hCG_1807616A0A1W2PRN6 198 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 ISPDA4D126 451 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 KCNAB3O43448 404 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 GPRIN2O60269 458 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 ZNF254O75437 659 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 KDM4BO94953 1096 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 MPZL1O95297 269 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 IGHV3-13P01766 116 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 ZNF250P15622 560 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 ZNF26P17031 533 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-208ENST00000469585 ANXA7P20073 488 aaKnown RBP5.26□□□□□ -1.57
PTCD3-208ENST00000469585 ACHEP22303 614 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 DDOSTP39656 456 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 NAA10P41227 235 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-208ENST00000469585 ALDH3B1P43353 468 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 GPR6P46095 362 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-208ENST00000469585 CX3CR1P49238 355 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 DAPP51397 102 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 FXYD6P3P58550 94 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 ACTA2P62736 377 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 ACTG2P63267 376 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 MRPS11P82912 194 aaKnown RBP5.26□□□□□ -1.57
PTCD3-208ENST00000469585 TNFAIP6P98066 277 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-208ENST00000469585 GGTLC2Q14390 218 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 RCN1Q15293 331 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 OR8G1Q15617 311 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 KCNJ8Q15842 424 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 TEX30Q5JUR7 227 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 TTC23Q5W5X9 447 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 DEGS2Q6QHC5 323 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 B3GLCTQ6Y288 498 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 MEPCEQ7L2J0 689 aaKnown RBP5.26□□□□□ -1.57
PTCD3-208ENST00000469585 SLC16A9Q7RTY1 509 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 ZNF584Q8IVC4 421 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 HS3ST5Q8IZT8 346 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 CBR4Q8N4T8 237 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 PACRGLQ8N7B6 248 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 SPERTQ8NA61 448 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 OR2Z1Q8NG97 314 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 OR8D4Q8NGM9 314 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 OR4Q3Q8NH05 313 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 LILRB1Q8NHL6 650 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-208ENST00000469585 SLC25A40Q8TBP6 338 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 KLF14Q8TD94 323 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-208ENST00000469585 HAVCR2Q8TDQ0 301 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 CYGBQ8WWM9 190 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 SLCO4A1Q96BD0 722 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 RAB39BQ96DA2 213 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 DOK1Q99704 481 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 PKP2Q99959 881 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 GABARAPL3Q9BY60 117 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 MRPL37Q9BZE1 423 aaKnown RBP5.26□□□□□ -1.57
PTCD3-208ENST00000469585 TPK1Q9H3S4 243 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms