RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 RBMY1FQ15415 496 aaKnown RBP3□□□□□ -1.93
LSM5-209ENST00000468872 AADACL4Q5VUY2 407 aa3□□□□□ -1.93
LSM5-209ENST00000468872 H3F3CQ6NXT2 135 aa3□□□□□ -1.93
LSM5-209ENST00000468872 IGFL3Q6UXB1 125 aa3□□□□□ -1.93
LSM5-209ENST00000468872 SLC16A13Q7RTY0 426 aa3□□□□□ -1.93
LSM5-209ENST00000468872 MRPL21Q7Z2W9 205 aaKnown RBP3□□□□□ -1.93
LSM5-209ENST00000468872 TRAM1L1Q8N609 369 aa3□□□□□ -1.93
LSM5-209ENST00000468872 ITFG1Q8TB96 612 aa3□□□□□ -1.93
LSM5-209ENST00000468872 FRZBQ92765 325 aa3□□□□□ -1.93
LSM5-209ENST00000468872 KIAA1143Q96AT1 154 aaPredicted RBP3□□□□□ -1.93
LSM5-209ENST00000468872 NAA50Q9GZZ1 169 aaKnown RBP3□□□□□ -1.93
LSM5-209ENST00000468872 CHRAC1Q9NRG0 131 aa3□□□□□ -1.93
LSM5-209ENST00000468872 RGS18Q9NS28 235 aa3□□□□□ -1.93
LSM5-209ENST00000468872 MCUBQ9NWR8 336 aa3□□□□□ -1.93
LSM5-209ENST00000468872 CHD7Q9P2D1 2997 aa3□□□□□ -1.93
LSM5-209ENST00000468872 COMMD3-BMI1R4GMX3 469 aa3□□□□□ -1.93
LSM5-209ENST00000468872 ATRQ13535 2644 aa3□□□□□ -1.93
LSM5-209ENST00000468872 OTOGLQ3ZCN5 2332 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 TRAV19A0A0A6YYK7 116 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 SERPINE3A8MV23 424 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 J3QKU1 62 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 SLC22A5O76082 557 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 VAMP5O95183 116 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 LINC00869P0C866 280 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 CD70P32970 193 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 CARD18P57730 90 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 ZNF829Q3KNS6 432 aaPredicted RBP2.99□□□□□ -1.93
LSM5-209ENST00000468872 C5orf47Q569G3 176 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 LINC00336Q6ZUF6 198 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 UBALD2Q8IYN6 164 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 LGI3Q8N145 548 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 KIF2BQ8N4N8 673 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 GPR21Q99679 349 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 FGF23Q9GZV9 251 aaPredicted RBP2.99□□□□□ -1.93
LSM5-209ENST00000468872 IL22Q9GZX6 179 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 ZNF282Q9UDV7 671 aaPredicted RBP2.99□□□□□ -1.93
LSM5-209ENST00000468872 CFAP45Q9UL16 551 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 DDX19BQ9UMR2 479 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 ARID1AO14497 2285 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 STAB1Q9NY15 2570 aa2.99□□□□□ -1.93
LSM5-209ENST00000468872 ZSWIM8A7E2V4 1837 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 CCDC168Q8NDH2 2452 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 IGLV4-60A0A075B6I1 120 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 IGKV2-28A0A075B6P5 120 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 C5orf63A6NC05 138 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 SLC22A20A6NK97 555 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 GABRR3A8MPY1 467 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 KRBOX1C9JBD0 128 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 H0YJW9 148 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 TRDMT1O14717 391 aaKnown RBP2.98□□□□□ -1.93
LSM5-209ENST00000468872 SPOPO43791 374 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 SLC16A7O60669 478 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 MPDU1O75352 247 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 HSBP1O75506 76 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 WISP3O95389 354 aaPredicted RBP2.98□□□□□ -1.93
LSM5-209ENST00000468872 OTCP00480 354 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 IGKV2D-28P01615 120 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 GLAP06280 429 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 CRYGCP07315 174 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 IL9P15248 144 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 MUC1P15941 1255 aaPredicted RBP2.98□□□□□ -1.93
LSM5-209ENST00000468872 RAB5AP20339 215 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 MYCNOSP40205 109 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 CD151P48509 253 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 HADHBP55084 474 aaKnown RBP2.98□□□□□ -1.93
LSM5-209ENST00000468872 TAS2R46P59540 309 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 TSC22D1Q15714 1073 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 ABCA11PQ4W5N1 156 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 MPV17L2Q567V2 206 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 UNC93AQ86WB7 457 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 OR52P1PQ8NH57 321 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 CIRBP-AS1Q8TBR5 109 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 PIH1D2Q8WWB5 315 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 ESR2Q92731 530 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 ISOC2Q96AB3 205 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 AGMATQ9BSE5 352 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 ZNF442Q9H7R0 627 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 RRAGDQ9NQL2 400 aaPredicted RBP2.98□□□□□ -1.93
LSM5-209ENST00000468872 SIRT7Q9NRC8 400 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 RFNGQ9Y644 331 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 DMXL2Q8TDJ6 3036 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 FLNCQ14315 2725 aa2.98□□□□□ -1.93
LSM5-209ENST00000468872 UBR4Q5T4S7 5183 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 FLNAP21333 2647 aaKnown RBP2.97□□□□□ -1.93
LSM5-209ENST00000468872 LRCOL1A6NCL2 159 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 CCNKO75909 580 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 HLA-DQA1P01909 254 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 CATP04040 527 aaKnown RBP2.97□□□□□ -1.93
LSM5-209ENST00000468872 ZNF806P0C7X5 589 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 MSR1P21757 451 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 GABRR2P28476 465 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 POLR2IP36954 125 aaKnown RBP2.97□□□□□ -1.93
LSM5-209ENST00000468872 CRADDP78560 199 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 LCN2P80188 198 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 CYP24A1Q07973 514 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 TFDP2Q14188 446 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 LRRC26Q2I0M4 334 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 C5orf64Q2M2E5 130 aa2.97□□□□□ -1.93
LSM5-209ENST00000468872 RWDD4Q6NW29 188 aaKnown RBP2.97□□□□□ -1.93
LSM5-209ENST00000468872 LINC00523Q86TU6 105 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 229.8 ms