RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 M0R1W7 72 aa17.85■□□□□ 0.45
TTC28-204ENST00000468807 SYNGR1O43759 233 aa17.85■□□□□ 0.45
TTC28-204ENST00000468807 SAA4P35542 130 aa17.85■□□□□ 0.45
TTC28-204ENST00000468807 TAF9Q16594 264 aa17.85■□□□□ 0.45
TTC28-204ENST00000468807 ODF4Q2M2E3 257 aa17.85■□□□□ 0.45
TTC28-204ENST00000468807 SMIM21Q3B7S5 101 aa17.85■□□□□ 0.45
TTC28-204ENST00000468807 CLVS2Q5SYC1 327 aa17.85■□□□□ 0.45
TTC28-204ENST00000468807 NCR3LG1Q68D85 454 aa17.85■□□□□ 0.45
TTC28-204ENST00000468807 KDM4DQ6B0I6 523 aa17.85■□□□□ 0.45
TTC28-204ENST00000468807 GDPGP1Q6ZNW5 385 aa17.85■□□□□ 0.45
TTC28-204ENST00000468807 ASRGL1Q7L266 308 aa17.85■□□□□ 0.45
TTC28-204ENST00000468807 METTL8Q9H825 291 aaKnown RBP17.85■□□□□ 0.45
TTC28-204ENST00000468807 RASL12Q9NYN1 266 aa17.85■□□□□ 0.45
TTC28-204ENST00000468807 ZNF222Q9UK12 451 aa17.85■□□□□ 0.45
TTC28-204ENST00000468807 RNF114Q9Y508 228 aa17.85■□□□□ 0.45
TTC28-204ENST00000468807 SNX5Q9Y5X3 404 aa17.85■□□□□ 0.45
TTC28-204ENST00000468807 RFPL4AA6NLU0 287 aa17.84■□□□□ 0.45
TTC28-204ENST00000468807 RFPL4AL1F8VTS6 287 aa17.84■□□□□ 0.45
TTC28-204ENST00000468807 H3BSH0 61 aa17.84■□□□□ 0.45
TTC28-204ENST00000468807 SRSF10O75494 262 aaKnown RBP17.84■□□□□ 0.45
TTC28-204ENST00000468807 KRT8P05787 483 aa17.84■□□□□ 0.45
TTC28-204ENST00000468807 EGR3Q06889 387 aa17.84■□□□□ 0.45
TTC28-204ENST00000468807 DHRS7BQ6IAN0 325 aaPredicted RBP17.84■□□□□ 0.45
TTC28-204ENST00000468807 ACP7Q6ZNF0 438 aa17.84■□□□□ 0.45
TTC28-204ENST00000468807 ZNF573Q86YE8 665 aa17.84■□□□□ 0.45
TTC28-204ENST00000468807 ELMOD2Q8IZ81 293 aa17.84■□□□□ 0.45
TTC28-204ENST00000468807 YIPF7Q8N8F6 280 aa17.84■□□□□ 0.45
TTC28-204ENST00000468807 POC1AQ8NBT0 407 aa17.84■□□□□ 0.45
TTC28-204ENST00000468807 TNFRSF14Q92956 283 aa17.84■□□□□ 0.45
TTC28-204ENST00000468807 CIB1Q99828 191 aa17.84■□□□□ 0.45
TTC28-204ENST00000468807 GABARAPL1Q9H0R8 117 aa17.84■□□□□ 0.45
TTC28-204ENST00000468807 ENOPH1Q9UHY7 261 aa17.84■□□□□ 0.45
TTC28-204ENST00000468807 MRM2Q9UI43 246 aaKnown RBP17.84■□□□□ 0.45
TTC28-204ENST00000468807 TRBV23-1A0A0A0MS06 115 aa17.83■□□□□ 0.44
TTC28-204ENST00000468807 J3QT63 122 aa17.83■□□□□ 0.44
TTC28-204ENST00000468807 SLC1A7O00341 560 aa17.83■□□□□ 0.44
TTC28-204ENST00000468807 APOL3O95236 402 aa17.83■□□□□ 0.44
TTC28-204ENST00000468807 FCGR1AP12314 374 aa17.83■□□□□ 0.44
TTC28-204ENST00000468807 CEBPDP49716 269 aaPredicted RBP17.83■□□□□ 0.44
TTC28-204ENST00000468807 UBE2E1P51965 193 aa17.83■□□□□ 0.44
TTC28-204ENST00000468807 C1orf122Q6ZSJ8 110 aa17.83■□□□□ 0.44
TTC28-204ENST00000468807 SSX6Q7RTT6 188 aa17.83■□□□□ 0.44
TTC28-204ENST00000468807 SDSLQ96GA7 329 aa17.83■□□□□ 0.44
TTC28-204ENST00000468807 RIBC2Q9H4K1 309 aa17.83■□□□□ 0.44
TTC28-204ENST00000468807 C19orf12Q9NSK7 152 aa17.83■□□□□ 0.44
TTC28-204ENST00000468807 OR14J1Q9UGF5 321 aa17.83■□□□□ 0.44
TTC28-204ENST00000468807 VPREB3Q9UKI3 123 aa17.83■□□□□ 0.44
TTC28-204ENST00000468807 SLC22A13Q9Y226 551 aa17.83■□□□□ 0.44
TTC28-204ENST00000468807 POLDIP2Q9Y2S7 368 aa17.83■□□□□ 0.44
TTC28-204ENST00000468807 V9GYS6 101 aa17.83■□□□□ 0.44
TTC28-204ENST00000468807 DLGAP1O14490 977 aa17.82■□□□□ 0.44
TTC28-204ENST00000468807 ANGPTL7O43827 346 aa17.82■□□□□ 0.44
TTC28-204ENST00000468807 NXPH2O95156 264 aa17.82■□□□□ 0.44
TTC28-204ENST00000468807 EFNB1P98172 346 aa17.82■□□□□ 0.44
TTC28-204ENST00000468807 OR5D13Q8NGL4 314 aa17.82■□□□□ 0.44
TTC28-204ENST00000468807 OR14K1Q8NGZ2 314 aa17.82■□□□□ 0.44
TTC28-204ENST00000468807 LINC01006Q8NI28 216 aa17.82■□□□□ 0.44
TTC28-204ENST00000468807 TRMT10AQ8TBZ6 339 aaKnown RBP17.82■□□□□ 0.44
TTC28-204ENST00000468807 PLEKHA1Q9HB21 404 aa17.82■□□□□ 0.44
TTC28-204ENST00000468807 WARS2Q9UGM6 360 aaKnown RBP17.82■□□□□ 0.44
TTC28-204ENST00000468807 A0A1B0GTI1 187 aa17.81■□□□□ 0.44
TTC28-204ENST00000468807 PGA5P0DJD9 388 aa17.81■□□□□ 0.44
TTC28-204ENST00000468807 PRDX2P32119 198 aa17.81■□□□□ 0.44
TTC28-204ENST00000468807 ATP6V1E1P36543 226 aa17.81■□□□□ 0.44
TTC28-204ENST00000468807 POLR2IP36954 125 aaKnown RBP17.81■□□□□ 0.44
TTC28-204ENST00000468807 ACSM1Q08AH1 577 aa17.81■□□□□ 0.44
TTC28-204ENST00000468807 TMEM42Q69YG0 159 aa17.81■□□□□ 0.44
TTC28-204ENST00000468807 CD177Q8N6Q3 437 aa17.81■□□□□ 0.44
TTC28-204ENST00000468807 OR10H4Q8NGA5 316 aa17.81■□□□□ 0.44
TTC28-204ENST00000468807 CITED1Q99966 193 aa17.81■□□□□ 0.44
TTC28-204ENST00000468807 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.81■□□□□ 0.44
TTC28-204ENST00000468807 SF3B6Q9Y3B4 125 aaKnown RBP17.81■□□□□ 0.44
TTC28-204ENST00000468807 VWFP04275 2813 aa17.8■□□□□ 0.44
TTC28-204ENST00000468807 FAM230AA0A1W2PPH8 454 aa17.8■□□□□ 0.44
TTC28-204ENST00000468807 A0A1W2PQL4 384 aaPredicted RBP17.8■□□□□ 0.44
TTC28-204ENST00000468807 PQLC2LA1A4F0 135 aa17.8■□□□□ 0.44
TTC28-204ENST00000468807 ANKRD61A6NGH8 418 aa17.8■□□□□ 0.44
TTC28-204ENST00000468807 KCNAB3O43448 404 aa17.8■□□□□ 0.44
TTC28-204ENST00000468807 CIB2O75838 187 aa17.8■□□□□ 0.44
TTC28-204ENST00000468807 ATP5HO75947 161 aa17.8■□□□□ 0.44
TTC28-204ENST00000468807 RPL31P62899 125 aaKnown RBP17.8■□□□□ 0.44
TTC28-204ENST00000468807 Q6ZSV7 163 aa17.8■□□□□ 0.44
TTC28-204ENST00000468807 ZNF561Q8N587 486 aa17.8■□□□□ 0.44
TTC28-204ENST00000468807 OR4M1Q8NGD0 313 aa17.8■□□□□ 0.44
TTC28-204ENST00000468807 OAZ3Q9UMX2 235 aa17.8■□□□□ 0.44
TTC28-204ENST00000468807 A0A1W2PPH5 198 aa17.79■□□□□ 0.44
TTC28-204ENST00000468807 SAC3D1A6NKF1 404 aa17.79■□□□□ 0.44
TTC28-204ENST00000468807 OR2T7P0C7T2 308 aa17.79■□□□□ 0.44
TTC28-204ENST00000468807 HTR1FP30939 366 aa17.79■□□□□ 0.44
TTC28-204ENST00000468807 KRTAP10-3P60369 221 aa17.79■□□□□ 0.44
TTC28-204ENST00000468807 ANGPTL5Q86XS5 388 aa17.79■□□□□ 0.44
TTC28-204ENST00000468807 MKXQ8IYA7 352 aa17.79■□□□□ 0.44
TTC28-204ENST00000468807 ZSCAN4Q8NAM6 433 aaPredicted RBP17.79■□□□□ 0.44
TTC28-204ENST00000468807 OR2T27Q8NH04 317 aa17.79■□□□□ 0.44
TTC28-204ENST00000468807 OR5R1Q8NH85 324 aa17.79■□□□□ 0.44
TTC28-204ENST00000468807 NRIP2Q9BQI9 281 aa17.79■□□□□ 0.44
TTC28-204ENST00000468807 ADI1Q9BV57 179 aa17.79■□□□□ 0.44
TTC28-204ENST00000468807 PPA2Q9H2U2 334 aa17.79■□□□□ 0.44
TTC28-204ENST00000468807 SLC7A11Q9UPY5 501 aa17.79■□□□□ 0.44
TTC28-204ENST00000468807 WNK1Q9H4A3 2382 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms