RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 C1QTNF5Q9BXJ0 243 aa12.25□□□□□ -0.45
COL27A1-203ENST00000468565 PTTG3PQ9NZH4 202 aa12.25□□□□□ -0.45
COL27A1-203ENST00000468565 LAMP5Q9UJQ1 280 aa12.25□□□□□ -0.45
COL27A1-203ENST00000468565 B4DSR2 109 aa12.24□□□□□ -0.45
COL27A1-203ENST00000468565 WNT9BO14905 357 aa12.24□□□□□ -0.45
COL27A1-203ENST00000468565 PAHP00439 452 aa12.24□□□□□ -0.45
COL27A1-203ENST00000468565 ACSM4P0C7M7 580 aa12.24□□□□□ -0.45
COL27A1-203ENST00000468565 TNFSF4P23510 183 aa12.24□□□□□ -0.45
COL27A1-203ENST00000468565 BLVRAP53004 296 aa12.24□□□□□ -0.45
COL27A1-203ENST00000468565 DVL1P1P54792 670 aaPredicted RBP12.24□□□□□ -0.45
COL27A1-203ENST00000468565 TNFAIP6P98066 277 aaPredicted RBP12.24□□□□□ -0.45
COL27A1-203ENST00000468565 ATAD3CQ5T2N8 411 aa12.24□□□□□ -0.45
COL27A1-203ENST00000468565 TIMD4Q96H15 378 aa12.24□□□□□ -0.45
COL27A1-203ENST00000468565 CMTM3Q96MX0 182 aa12.24□□□□□ -0.45
COL27A1-203ENST00000468565 THAP7Q9BT49 309 aaPredicted RBP12.24□□□□□ -0.45
COL27A1-203ENST00000468565 NARFLQ9H6Q4 476 aa12.24□□□□□ -0.45
COL27A1-203ENST00000468565 WDR76Q9H967 626 aa12.24□□□□□ -0.45
COL27A1-203ENST00000468565 NEK6Q9HC98 313 aa12.24□□□□□ -0.45
COL27A1-203ENST00000468565 BRD7Q9NPI1 651 aa12.24□□□□□ -0.45
COL27A1-203ENST00000468565 RABL2AQ9UBK7 228 aaPredicted RBP12.24□□□□□ -0.45
COL27A1-203ENST00000468565 RABL2BQ9UNT1 228 aa12.24□□□□□ -0.45
COL27A1-203ENST00000468565 CUBNO60494 3623 aa12.24□□□□□ -0.45
COL27A1-203ENST00000468565 ATF1P18846 271 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 HNF1AP20823 631 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 MAPK3P27361 379 aaPredicted RBP12.23□□□□□ -0.45
COL27A1-203ENST00000468565 HLA-DMAP28067 261 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 EGR3Q06889 387 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 ALKBH1Q13686 389 aaKnown RBP12.23□□□□□ -0.45
COL27A1-203ENST00000468565 PCK2Q16822 640 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 CEP78Q5JTW2 689 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 FAM120AOSQ5T036 256 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 Q6ZR03 302 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 OR6N2Q8NGY6 317 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 ZNF671Q8TAW3 534 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 RAB1CQ92928 201 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 INTS14Q96SY0 518 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 KRTAP3-3Q9BYR6 98 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 KRTAP3-2Q9BYR7 98 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 NOX4Q9NPH5 578 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 DDX28Q9NUL7 540 aaKnown RBP12.23□□□□□ -0.45
COL27A1-203ENST00000468565 SPATA2Q9UM82 520 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 WIPI2Q9Y4P8 454 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 CACNG2Q9Y698 323 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 TVP23AA6NH52 213 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 F5H5K5 113 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 PSMD9O00233 223 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 RGS13O14921 159 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 ORC5O43913 435 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 SNRPBP14678 240 aaKnown RBP12.23□□□□□ -0.45
COL27A1-203ENST00000468565 TNFRSF1AP19438 455 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 SRMP19623 302 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 LMO4P61968 165 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 HLXQ14774 488 aaPredicted RBP12.23□□□□□ -0.45
COL27A1-203ENST00000468565 SMUG1Q53HV7 270 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 TEX30Q5JUR7 227 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 OR5H6Q8NGV6 325 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 OR5AK2Q8NH90 309 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 CCL17Q92583 94 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 SLITRK2Q9H156 845 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 IL19Q9UHD0 177 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 MRM2Q9UI43 246 aaKnown RBP12.23□□□□□ -0.45
COL27A1-203ENST00000468565 IKZF2Q9UKS7 526 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 KLHDC2Q9Y2U9 406 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 AK6Q9Y3D8 172 aaKnown RBP12.23□□□□□ -0.45
COL27A1-203ENST00000468565 SVEP1Q4LDE5 3571 aa12.23□□□□□ -0.45
COL27A1-203ENST00000468565 IQCF6A8MYZ5 107 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 PRR32B1ATL7 298 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 FAM157AC9JC47 383 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 RPP14O95059 124 aaKnown RBP12.22□□□□□ -0.45
COL27A1-203ENST00000468565 ZFPL1O95159 310 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 NANOS3P60323 173 aaKnown RBP12.22□□□□□ -0.45
COL27A1-203ENST00000468565 CR1LQ2VPA4 569 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 ZFP69Q49AA0 526 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 SPRNQ5BIV9 151 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 UBE2NLQ5JXB2 153 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 AVPI1Q5T686 147 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 LIPNQ5VXI9 398 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 GLCCI1Q86VQ1 547 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 OR8G5Q8NG78 346 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 OR2Z1Q8NG97 314 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 OR10S1Q8NGN2 331 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 TRIM63Q969Q1 353 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 SPTSSAQ969W0 71 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 ZNF486Q96H40 463 aaPredicted RBP12.22□□□□□ -0.45
COL27A1-203ENST00000468565 MED30Q96HR3 178 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 ST6GAL2Q96JF0 529 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 DERL3Q96Q80 235 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 OCSTAMPQ9BR26 566 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 TREM2Q9NZC2 230 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 NLKQ9UBE8 527 aa12.22□□□□□ -0.45
COL27A1-203ENST00000468565 M0R135 149 aa12.21□□□□□ -0.45
COL27A1-203ENST00000468565 SELEP16581 610 aa12.21□□□□□ -0.45
COL27A1-203ENST00000468565 ALOX5APP20292 161 aa12.21□□□□□ -0.45
COL27A1-203ENST00000468565 OTX1P32242 354 aaPredicted RBP12.21□□□□□ -0.45
COL27A1-203ENST00000468565 OR2T2Q6IF00 324 aa12.21□□□□□ -0.45
COL27A1-203ENST00000468565 DTX3Q8N9I9 347 aa12.21□□□□□ -0.45
COL27A1-203ENST00000468565 RAB39BQ96DA2 213 aa12.21□□□□□ -0.45
COL27A1-203ENST00000468565 ZNF799Q96GE5 643 aa12.21□□□□□ -0.45
COL27A1-203ENST00000468565 MARVELD1Q9BSK0 173 aa12.21□□□□□ -0.45
COL27A1-203ENST00000468565 MRI1Q9BV20 369 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms