RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 GPR173Q9NS66 373 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 OR52A1Q9UKL2 312 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 COPS3Q9UNS2 423 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 SLC7A11Q9UPY5 501 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 SNX5Q9Y5X3 404 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 R4GMQ9 66 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 IGKV1D-17A0A075B6S4 117 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 RFPL4AA6NLU0 287 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 RFPL4AL1F8VTS6 287 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 M0R129 80 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 KCNAB3O43448 404 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 RPP14O95059 124 aaKnown RBP14.36□□□□□ -0.11
COL7A1-206ENST00000466591 FASP25445 335 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 RPL31P62899 125 aaKnown RBP14.36□□□□□ -0.11
COL7A1-206ENST00000466591 TAF9Q16594 264 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 NXNL2Q5VZ03 156 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 FAHD1Q6P587 224 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 BATF2Q8N1L9 274 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 ZNF561Q8N587 486 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 Q8N7P7 452 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 TMEM163Q8TC26 289 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 IL4I1Q96RQ9 567 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 TBX5Q99593 518 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 CITED1Q99966 193 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 FGF23Q9GZV9 251 aaPredicted RBP14.36□□□□□ -0.11
COL7A1-206ENST00000466591 MMP27Q9H306 513 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 HEXA-AS1Q9H8Q6 139 aa14.36□□□□□ -0.11
COL7A1-206ENST00000466591 J3QT63 122 aa14.35□□□□□ -0.11
COL7A1-206ENST00000466591 PRDX2P32119 198 aa14.35□□□□□ -0.11
COL7A1-206ENST00000466591 EGR3Q06889 387 aa14.35□□□□□ -0.11
COL7A1-206ENST00000466591 ODF4Q2M2E3 257 aa14.35□□□□□ -0.11
COL7A1-206ENST00000466591 C1orf146Q5VVC0 180 aa14.35□□□□□ -0.11
COL7A1-206ENST00000466591 ACP7Q6ZNF0 438 aa14.35□□□□□ -0.11
COL7A1-206ENST00000466591 PLEKHG7Q6ZR37 379 aa14.35□□□□□ -0.11
COL7A1-206ENST00000466591 FAM220AQ7Z4H9 259 aa14.35□□□□□ -0.11
COL7A1-206ENST00000466591 BCDIN3DQ7Z5W3 292 aaKnown RBP14.35□□□□□ -0.11
COL7A1-206ENST00000466591 POC1AQ8NBT0 407 aa14.35□□□□□ -0.11
COL7A1-206ENST00000466591 TRMT10AQ8TBZ6 339 aaKnown RBP14.35□□□□□ -0.11
COL7A1-206ENST00000466591 PPP1R14AQ96A00 147 aa14.35□□□□□ -0.11
COL7A1-206ENST00000466591 ZNF488Q96MN9 340 aa14.35□□□□□ -0.11
COL7A1-206ENST00000466591 CLN6Q9NWW5 311 aa14.35□□□□□ -0.11
COL7A1-206ENST00000466591 MAB21L2Q9Y586 359 aa14.35□□□□□ -0.11
COL7A1-206ENST00000466591 FAM230AA0A1W2PPH8 454 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 A6NIN4 97 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 H3BUX3 64 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 DLGAP1O14490 977 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 MITFO75030 526 aaPredicted RBP14.34□□□□□ -0.11
COL7A1-206ENST00000466591 TTRP02766 147 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 OCM2P0CE71 109 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 OCMP0CE72 109 aaPredicted RBP14.34□□□□□ -0.11
COL7A1-206ENST00000466591 FCGR1AP12314 374 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 COX7A1P24310 79 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 ATP6AP1Q15904 470 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 LY6EQ16553 131 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 Q6ZSV7 163 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 ASCC1Q8N9N2 400 aaKnown RBP14.34□□□□□ -0.11
COL7A1-206ENST00000466591 ZSCAN4Q8NAM6 433 aaPredicted RBP14.34□□□□□ -0.11
COL7A1-206ENST00000466591 OR4M1Q8NGD0 313 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 OR4C13Q8NGP0 309 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 OR2T27Q8NH04 317 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 SDSLQ96GA7 329 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 SSX3Q99909 188 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 RAB18Q9NP72 206 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 MGAM2Q2M2H8 2515 aa14.34□□□□□ -0.11
COL7A1-206ENST00000466591 H3BSH0 61 aa14.33□□□□□ -0.12
COL7A1-206ENST00000466591 MAGEB4O15481 346 aaPredicted RBP14.33□□□□□ -0.12
COL7A1-206ENST00000466591 SYT7O43581 403 aa14.33□□□□□ -0.12
COL7A1-206ENST00000466591 SYNGR1O43759 233 aa14.33□□□□□ -0.12
COL7A1-206ENST00000466591 CIB2O75838 187 aa14.33□□□□□ -0.12
COL7A1-206ENST00000466591 SERPINA3P01011 423 aa14.33□□□□□ -0.12
COL7A1-206ENST00000466591 PIPP12273 146 aaPredicted RBP14.33□□□□□ -0.12
COL7A1-206ENST00000466591 GABRA5P31644 462 aa14.33□□□□□ -0.12
COL7A1-206ENST00000466591 CEBPDP49716 269 aaPredicted RBP14.33□□□□□ -0.12
COL7A1-206ENST00000466591 C2orf68Q2NKX9 166 aa14.33□□□□□ -0.12
COL7A1-206ENST00000466591 SLX4IPQ5VYV7 408 aa14.33□□□□□ -0.12
COL7A1-206ENST00000466591 ELMOD2Q8IZ81 293 aa14.33□□□□□ -0.12
COL7A1-206ENST00000466591 BEND2Q8NDZ0 799 aa14.33□□□□□ -0.12
COL7A1-206ENST00000466591 OR10H4Q8NGA5 316 aa14.33□□□□□ -0.12
COL7A1-206ENST00000466591 UTP4Q969X6 686 aaKnown RBP14.33□□□□□ -0.12
COL7A1-206ENST00000466591 SLC7A6OSQ96CW6 309 aaPredicted RBP14.33□□□□□ -0.12
COL7A1-206ENST00000466591 RBM4BQ9BQ04 359 aaKnown RBP14.33□□□□□ -0.12
COL7A1-206ENST00000466591 RIBC2Q9H4K1 309 aa14.33□□□□□ -0.12
COL7A1-206ENST00000466591 ADGRL4Q9HBW9 690 aa14.33□□□□□ -0.12
COL7A1-206ENST00000466591 C19orf12Q9NSK7 152 aa14.33□□□□□ -0.12
COL7A1-206ENST00000466591 USE1Q9NZ43 259 aa14.33□□□□□ -0.12
COL7A1-206ENST00000466591 AP4S1Q9Y587 144 aa14.33□□□□□ -0.12
COL7A1-206ENST00000466591 GATBO75879 557 aaKnown RBP14.32□□□□□ -0.12
COL7A1-206ENST00000466591 CLPXO76031 633 aa14.32□□□□□ -0.12
COL7A1-206ENST00000466591 PGA5P0DJD9 388 aa14.32□□□□□ -0.12
COL7A1-206ENST00000466591 ERVFRD-1P60508 538 aa14.32□□□□□ -0.12
COL7A1-206ENST00000466591 LRRC75BQ2VPJ9 315 aa14.32□□□□□ -0.12
COL7A1-206ENST00000466591 Q6ZTK2 550 aa14.32□□□□□ -0.12
COL7A1-206ENST00000466591 MKXQ8IYA7 352 aa14.32□□□□□ -0.12
COL7A1-206ENST00000466591 CADM1Q9BY67 442 aaKnown RBP14.32□□□□□ -0.12
COL7A1-206ENST00000466591 ABCB10Q9NRK6 738 aa14.32□□□□□ -0.12
COL7A1-206ENST00000466591 WARS2Q9UGM6 360 aaKnown RBP14.32□□□□□ -0.12
COL7A1-206ENST00000466591 ZNF222Q9UK12 451 aa14.32□□□□□ -0.12
COL7A1-206ENST00000466591 ORC6Q9Y5N6 252 aa14.32□□□□□ -0.12
COL7A1-206ENST00000466591 ZAR1LA6NP61 321 aa14.31□□□□□ -0.12
COL7A1-206ENST00000466591 PRR32B1ATL7 298 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms