RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 USP43Q70EL4 1123 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 C1QL2Q7Z5L3 287 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 MOGAT3Q86VF5 341 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 OR4D6Q8NGJ1 314 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 YIPF5Q969M3 257 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 ERGIC1Q969X5 290 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 SLC25A28Q96A46 364 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 LURAP1Q96LR2 239 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 EGLN1Q9GZT9 426 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 DCSTAMPQ9H295 470 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 CXorf56Q9H5V9 222 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 CNTD2Q9H8S5 307 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 DECR2Q9NUI1 292 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 UFSP2Q9NUQ7 469 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 DCAF16Q9NXF7 216 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 NDUFA13Q9P0J0 144 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 RSL24D1Q9UHA3 163 aaKnown RBP9.4□□□□□ -0.9
VCP-204ENST00000466100 CACNG2Q9Y698 323 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 V9GY05 133 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 ABCA2Q9BZC7 2435 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 IGHV1-69-2A0A0G2JMI3 117 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 IFITM5A6NNB3 132 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 NOTOA8MTQ0 251 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.39□□□□□ -0.91
VCP-204ENST00000466100 AIPO00170 330 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 CDIPTO14735 213 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 PDCD5O14737 125 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 MAGEB3O15480 346 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 SPRY1O43609 319 aaPredicted RBP9.39□□□□□ -0.91
VCP-204ENST00000466100 NOS1APO75052 506 aaPredicted RBP9.39□□□□□ -0.91
VCP-204ENST00000466100 F12P00748 615 aaPredicted RBP9.39□□□□□ -0.91
VCP-204ENST00000466100 ACAA1P09110 424 aaPredicted RBP9.39□□□□□ -0.91
VCP-204ENST00000466100 OCMP0CE72 109 aaPredicted RBP9.39□□□□□ -0.91
VCP-204ENST00000466100 PGA5P0DJD9 388 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 PTGFRP43088 359 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 PTH2RP49190 550 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 EFNA4P52798 201 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 CAV3P56539 151 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 ERVK11-1P61568 191 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 HOXA4Q00056 320 aaPredicted RBP9.39□□□□□ -0.91
VCP-204ENST00000466100 RIN1Q13671 783 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 GLT8D1Q68CQ7 371 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 SFXN4Q6P4A7 337 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 SLC25A26Q70HW3 274 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 SAXO1Q8IYX7 474 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 JAGN1Q8N5M9 183 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 ZSCAN4Q8NAM6 433 aaPredicted RBP9.39□□□□□ -0.91
VCP-204ENST00000466100 PXT1Q8NFP0 134 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 OR5D18Q8NGL1 313 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 OR10Z1Q8NGY1 313 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 DYNC2LI1Q8TCX1 351 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 SLC25A46Q96AG3 418 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 FOXRED1Q96CU9 486 aaPredicted RBP9.39□□□□□ -0.91
VCP-204ENST00000466100 MBD6Q96DN6 1003 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 CPNE2Q96FN4 548 aaPredicted RBP9.39□□□□□ -0.91
VCP-204ENST00000466100 BARHL1Q9BZE3 327 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 GSX2Q9BZM3 304 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 FN3KRPQ9HA64 309 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 BATF3Q9NR55 127 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 C1orf123Q9NWV4 160 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 MTCH1Q9NZJ7 389 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 PPP1R3CQ9UQK1 317 aa9.39□□□□□ -0.91
VCP-204ENST00000466100 FLNAP21333 2647 aaKnown RBP9.39□□□□□ -0.91
VCP-204ENST00000466100 A6NLC8 198 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 SRRM5B3KS81 715 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 F8VVB4 439 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 F8VWA3 439 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 LYNX1G3V0Z9 82 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 TPD52L2O43399 206 aaKnown RBP9.38□□□□□ -0.91
VCP-204ENST00000466100 ANGPTL7O43827 346 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 NOL3O60936 208 aaKnown RBP9.38□□□□□ -0.91
VCP-204ENST00000466100 KDM4BO94953 1096 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 PLATP00750 562 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 LHBP01229 141 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 LYNX1P0DP58 116 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 DAOP14920 347 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 EGR1P18146 543 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 COL8A2P25067 703 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 POU3F4P49335 361 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 PSMD7P51665 324 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 GCSAMQ8N6F7 178 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 POC1AQ8NBT0 407 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 Q8NFD4 153 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 OR6M1Q8NGM8 313 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 TBC1D15Q8TC07 691 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 TNFAIP8L1Q8WVP5 186 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 NINJ1Q92982 152 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 DGCR14Q96DF8 476 aaKnown RBP9.38□□□□□ -0.91
VCP-204ENST00000466100 ZNF488Q96MN9 340 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 GPER1Q99527 375 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 NRIP2Q9BQI9 281 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 HES4Q9HCC6 221 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 BEX4Q9NWD9 120 aaPredicted RBP9.38□□□□□ -0.91
VCP-204ENST00000466100 IL36GQ9NZH8 169 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 MRPS28Q9Y2Q9 187 aaKnown RBP9.38□□□□□ -0.91
VCP-204ENST00000466100 POLDIP2Q9Y2S7 368 aa9.38□□□□□ -0.91
VCP-204ENST00000466100 DOCK11Q5JSL3 2073 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 A0A0B4J203 849 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 CCDC160A6NGH7 325 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 C3orf80F5H4A9 247 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms