RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 CYSLTR2Q9NS75 346 aa3.99□□□□□ -1.77
EXOSC3-204ENST00000465860 TMEM100Q9NV29 134 aa3.99□□□□□ -1.77
EXOSC3-204ENST00000465860 HIF1ANQ9NWT6 349 aa3.99□□□□□ -1.77
EXOSC3-204ENST00000465860 TMEM160Q9NX00 188 aa3.99□□□□□ -1.77
EXOSC3-204ENST00000465860 FAM206AQ9NX38 181 aa3.99□□□□□ -1.77
EXOSC3-204ENST00000465860 UBAP1Q9NZ09 502 aa3.99□□□□□ -1.77
EXOSC3-204ENST00000465860 DUX4Q9UBX2 424 aa3.99□□□□□ -1.77
EXOSC3-204ENST00000465860 OPN4Q9UHM6 478 aa3.99□□□□□ -1.77
EXOSC3-204ENST00000465860 RHBDD3Q9Y3P4 386 aa3.99□□□□□ -1.77
EXOSC3-204ENST00000465860 NPTNQ9Y639 398 aa3.99□□□□□ -1.77
EXOSC3-204ENST00000465860 SOX21Q9Y651 276 aaPredicted RBP3.99□□□□□ -1.77
EXOSC3-204ENST00000465860 DSCAML1Q8TD84 2053 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 LOC105371242A0A075B767 164 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 GGT3PA6NGU5 568 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 A6NIN4 97 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 CEACAM18A8MTB9 384 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 B4DSR2 109 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 H3BSH0 61 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 TNFRSF13BO14836 293 aaPredicted RBP3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 PHF1O43189 567 aaPredicted RBP3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 ENTPD6O75354 484 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 PTBP3O95758 552 aaKnown RBP3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 IGLV3-1P01715 115 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 MSMBP08118 114 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 GABRB1P18505 474 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 HSD11B1P28845 292 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 CD80P33681 288 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 DVL1P1P54792 670 aaPredicted RBP3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 CXCR4P61073 352 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 BTG1P62324 171 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 GRB2P62993 217 aaKnown RBP3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 PAX2Q02962 417 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 RAB32Q13637 225 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 TAF13Q15543 124 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 OR8G1Q15617 311 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 OR8B8Q15620 311 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 ZSCAN26Q16670 478 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 CHRFAM7AQ494W8 412 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 KLHL22Q53GT1 634 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 NXNL2Q5VZ03 156 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 RUSC1-AS1Q66K80 236 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 FAHD2BQ6P2I3 314 aaPredicted RBP3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 UNQ6126/PRO20091Q6UXV3 157 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF841Q6ZN19 808 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 MRPL21Q7Z2W9 205 aaKnown RBP3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 KCTD20Q7Z5Y7 419 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 SLC35F2Q8IXU6 374 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 GCSAMQ8N6F7 178 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 DEFB108BQ8NET1 73 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 OR51G2Q8NGK0 314 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 OR51E1Q8TCB6 317 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 SPRYD4Q8WW59 207 aaPredicted RBP3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 HPSE2Q8WWQ2 592 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 DNAJC9Q8WXX5 260 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 RAB1CQ92928 201 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 TMEM186Q96B77 213 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 FAHD2AQ96GK7 314 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 PLEKHA8Q96JA3 519 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 COG8Q96MW5 612 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 GAL3ST1Q99999 423 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 TMEM246Q9BRR3 403 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 ADAT1Q9BUB4 502 aaKnown RBP3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 BEX2Q9BXY8 128 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 YIPF3Q9GZM5 350 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 EGLN1Q9GZT9 426 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 SHARPINQ9H0F6 387 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 PATZ1Q9HBE1 687 aaKnown RBP3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 USE1Q9NZ43 259 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 CTSZQ9UBR2 303 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 MRM2Q9UI43 246 aaKnown RBP3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 LAMP5Q9UJQ1 280 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF580Q9UK33 172 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 KCNS2Q9ULS6 477 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 SLC22A13Q9Y226 551 aa3.98□□□□□ -1.77
EXOSC3-204ENST00000465860 PKD1L1Q8TDX9 2849 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 TRRAPQ9Y4A5 3859 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 NBEAL1Q6ZS30 2694 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 IGHV3OR15-7A0A075B7D8 119 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 A0A1B0GTI1 187 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 TMEM269A0A1B0GVZ9 245 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 A0A1W2PQL4 384 aaPredicted RBP3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF850A8MQ14 1090 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 J3QRE1 110 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 P2RY10O00398 339 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 XRCC2O43543 280 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 SPRY2O43597 315 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 RRP9O43818 475 aaKnown RBP3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 GMDSO60547 372 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 RHBDL1O75783 438 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 RPP14O95059 124 aaKnown RBP3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 CLIC3O95833 236 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 LHBP01229 141 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 TTRP02766 147 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 WNT2P09544 360 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 FAM157CP0CG43 387 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 FCGR1AP12314 374 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 SELLP14151 372 aa3.97□□□□□ -1.77
EXOSC3-204ENST00000465860 SRD5A1P18405 259 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms