RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 HSMCR30P0CW71 290 aa14.19□□□□□ -0.14
USP39-211ENST00000465282 MAP2K4P45985 399 aa14.19□□□□□ -0.14
USP39-211ENST00000465282 PPP3R1P63098 170 aa14.19□□□□□ -0.14
USP39-211ENST00000465282 DOC2BQ14184 412 aa14.19□□□□□ -0.14
USP39-211ENST00000465282 FAM201AQ5SY85 155 aa14.19□□□□□ -0.14
USP39-211ENST00000465282 CLEC9AQ6UXN8 241 aa14.19□□□□□ -0.14
USP39-211ENST00000465282 NLRC3Q7RTR2 1065 aa14.19□□□□□ -0.14
USP39-211ENST00000465282 FAM90A1Q86YD7 464 aa14.19□□□□□ -0.14
USP39-211ENST00000465282 MKXQ8IYA7 352 aa14.19□□□□□ -0.14
USP39-211ENST00000465282 BOLLQ8N9W6 283 aaKnown RBP14.19□□□□□ -0.14
USP39-211ENST00000465282 LINC01356Q8N9X3 169 aa14.19□□□□□ -0.14
USP39-211ENST00000465282 POC1AQ8NBT0 407 aa14.19□□□□□ -0.14
USP39-211ENST00000465282 NPRL2Q8WTW4 380 aa14.19□□□□□ -0.14
USP39-211ENST00000465282 DNTTIP1Q9H147 329 aa14.19□□□□□ -0.14
USP39-211ENST00000465282 METTL17Q9H7H0 456 aaPredicted RBP14.19□□□□□ -0.14
USP39-211ENST00000465282 CSPG4Q6UVK1 2322 aa14.19□□□□□ -0.14
USP39-211ENST00000465282 TLN2Q9Y4G6 2542 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 ABCA2Q9BZC7 2435 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 IGKV1-27A0A075B6S5 117 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 TRBV5-7A0A0A0MS05 114 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 CEACAM18A8MTB9 384 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 F5H0A9 414 aaPredicted RBP14.18□□□□□ -0.14
USP39-211ENST00000465282 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.18□□□□□ -0.14
USP39-211ENST00000465282 AKR7A2O43488 359 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 RHBDL1O75783 438 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 ZNF205O95201 554 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 WNT2P09544 360 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 PGA5P0DJD9 388 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 FSTP19883 344 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 GLRA1P23415 457 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 IL2RGP31785 369 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 UBE2UQ5VVX9 321 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 LIPKQ5VXJ0 399 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 UNQ9370/PRO34162Q6UXP9 181 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 CALHM1Q8IU99 346 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 Q8IYB0 196 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 OR13C5Q8NGS8 318 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 PHYHIPQ92561 330 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 TMIGD2Q96BF3 282 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 NEIL1Q96FI4 390 aaPredicted RBP14.18□□□□□ -0.14
USP39-211ENST00000465282 RHOFQ9HBH0 211 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 TMEM138Q9NPI0 162 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 KAAG1Q9UBP8 84 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 FOXJ3Q9UPW0 622 aa14.18□□□□□ -0.14
USP39-211ENST00000465282 C3orf80F5H4A9 247 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 TNFRSF13BO14836 293 aaPredicted RBP14.17□□□□□ -0.14
USP39-211ENST00000465282 FOXH1O75593 365 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 LY6G6DO95868 133 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 HCKP08631 526 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 RPS2P15880 293 aaKnown RBP14.17□□□□□ -0.14
USP39-211ENST00000465282 IGFBP3P17936 291 aaPredicted RBP14.17□□□□□ -0.14
USP39-211ENST00000465282 EGR1P18146 543 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 PCMT1P22061 227 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 CD80P33681 288 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 NPY4RP50391 375 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 KRTAP1-1Q07627 177 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 HNRNPA0Q13151 305 aaKnown RBP14.17□□□□□ -0.14
USP39-211ENST00000465282 KISS1Q15726 138 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 SMIM21Q3B7S5 101 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 C11orf91Q3C1V1 193 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 ACSM3Q53FZ2 586 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 ATPAF1Q5TC12 328 aaPredicted RBP14.17□□□□□ -0.14
USP39-211ENST00000465282 SFRP4Q6FHJ7 346 aaPredicted RBP14.17□□□□□ -0.14
USP39-211ENST00000465282 ANGPTL5Q86XS5 388 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 CDH26Q8IXH8 852 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 PHC2Q8IXK0 858 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 SAXO1Q8IYX7 474 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 ZSCAN4Q8NAM6 433 aaPredicted RBP14.17□□□□□ -0.14
USP39-211ENST00000465282 DEFB108BQ8NET1 73 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 OR8B3Q8NGG8 313 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 MSI2Q96DH6 328 aaKnown RBP14.17□□□□□ -0.14
USP39-211ENST00000465282 DERL3Q96Q80 235 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 OR14A2Q96R54 314 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 OR8B2Q96RD0 313 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 NRIP2Q9BQI9 281 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 TAS2R4Q9NYW5 299 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 DNAJB11Q9UBS4 358 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 MALRD1Q5VYJ5 2156 aa14.17□□□□□ -0.14
USP39-211ENST00000465282 SYNGR1O43759 233 aa14.16□□□□□ -0.14
USP39-211ENST00000465282 SC5DO75845 299 aa14.16□□□□□ -0.14
USP39-211ENST00000465282 MSMBP08118 114 aa14.16□□□□□ -0.14
USP39-211ENST00000465282 BDKRB2P30411 391 aa14.16□□□□□ -0.14
USP39-211ENST00000465282 GABRA5P31644 462 aa14.16□□□□□ -0.14
USP39-211ENST00000465282 TGFBR2P37173 567 aa14.16□□□□□ -0.14
USP39-211ENST00000465282 RBMXP38159 391 aaKnown RBP14.16□□□□□ -0.14
USP39-211ENST00000465282 ERVK11-1P61568 191 aa14.16□□□□□ -0.14
USP39-211ENST00000465282 PDZK1IP1Q13113 114 aa14.16□□□□□ -0.14
USP39-211ENST00000465282 ESCO2Q56NI9 601 aa14.16□□□□□ -0.14
USP39-211ENST00000465282 ARMCX4Q5H9R4 360 aa14.16□□□□□ -0.14
USP39-211ENST00000465282 ASPHD2Q6ICH7 369 aa14.16□□□□□ -0.14
USP39-211ENST00000465282 SLC25A26Q70HW3 274 aa14.16□□□□□ -0.14
USP39-211ENST00000465282 SLC36A1Q7Z2H8 476 aa14.16□□□□□ -0.14
USP39-211ENST00000465282 OR51F2Q8NH61 342 aa14.16□□□□□ -0.14
USP39-211ENST00000465282 CEP19Q96LK0 163 aa14.16□□□□□ -0.14
USP39-211ENST00000465282 TMED9Q9BVK6 235 aa14.16□□□□□ -0.14
USP39-211ENST00000465282 HES4Q9HCC6 221 aa14.16□□□□□ -0.14
USP39-211ENST00000465282 POLR3KQ9Y2Y1 108 aaPredicted RBP14.16□□□□□ -0.14
USP39-211ENST00000465282 TRAV20A0A0B4J274 112 aa14.15□□□□□ -0.14
USP39-211ENST00000465282 PPIAL4CA0A0B4J2A2 164 aa14.15□□□□□ -0.14
USP39-211ENST00000465282 MEGF11A6BM72 1044 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms