RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 TMEM203Q969S6 136 aa14.71□□□□□ -0.05
CPSF4-209ENST00000465132 FOXRED1Q96CU9 486 aaPredicted RBP14.71□□□□□ -0.05
CPSF4-209ENST00000465132 TRBV5-7A0A0A0MS05 114 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 A6NLC8 198 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 PDCD5O14737 125 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 SC5DO75845 299 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 ALDOBP05062 364 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 GRPP07492 148 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 MYL9P24844 172 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 AZGP1P25311 298 aaKnown RBP14.7□□□□□ -0.06
CPSF4-209ENST00000465132 BDKRB2P30411 391 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 RPL5P46777 297 aaKnown RBP14.7□□□□□ -0.06
CPSF4-209ENST00000465132 GPM6AP51674 278 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 MTCP1P56278 107 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 TMEM33P57088 247 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 RPS25P62851 125 aaKnown RBP14.7□□□□□ -0.06
CPSF4-209ENST00000465132 RIN1Q13671 783 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 FAM76BQ5HYJ3 339 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 CD200R1LQ6Q8B3 271 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 LINC01356Q8N9X3 169 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 Q8TCH9 128 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 ITLN1Q8WWA0 313 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 PCDHB16Q9NRJ7 776 aa14.7□□□□□ -0.06
CPSF4-209ENST00000465132 FAM230AA0A1W2PPH8 454 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 PQLC2LA1A4F0 135 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 A6NIN4 97 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 CLDN25C9JDP6 229 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 GABRPO00591 440 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 UCHL1P09936 223 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 SRMP19623 302 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 FGF9P31371 208 aaPredicted RBP14.69□□□□□ -0.06
CPSF4-209ENST00000465132 GP2P55259 537 aaKnown RBP14.69□□□□□ -0.06
CPSF4-209ENST00000465132 MAB21L1Q13394 359 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 UBE2V2Q15819 145 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 KCNJ8Q15842 424 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 SSX1Q16384 188 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 GPR141Q7Z602 305 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 MKXQ8IYA7 352 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 GTF3AQ92664 365 aaKnown RBP14.69□□□□□ -0.06
CPSF4-209ENST00000465132 RAB1CQ92928 201 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 GPER1Q99527 375 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 S100A13Q99584 98 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 PKIBQ9C010 78 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 RHOFQ9HBH0 211 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 GCM1Q9NP62 436 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 EXOSC4Q9NPD3 245 aaKnown RBP14.69□□□□□ -0.06
CPSF4-209ENST00000465132 NOX4Q9NPH5 578 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 SNTG1Q9NSN8 517 aa14.69□□□□□ -0.06
CPSF4-209ENST00000465132 SF3B6Q9Y3B4 125 aaKnown RBP14.69□□□□□ -0.06
CPSF4-209ENST00000465132 TCF21O43680 179 aa14.68□□□□□ -0.06
CPSF4-209ENST00000465132 HPXP02790 462 aa14.68□□□□□ -0.06
CPSF4-209ENST00000465132 SMIM18P0DKX4 95 aa14.68□□□□□ -0.06
CPSF4-209ENST00000465132 CFHR2P36980 270 aa14.68□□□□□ -0.06
CPSF4-209ENST00000465132 GLT8D1Q68CQ7 371 aa14.68□□□□□ -0.06
CPSF4-209ENST00000465132 ZNF529Q6P280 563 aa14.68□□□□□ -0.06
CPSF4-209ENST00000465132 MOGAT3Q86VF5 341 aa14.68□□□□□ -0.06
CPSF4-209ENST00000465132 Q8IYB0 196 aa14.68□□□□□ -0.06
CPSF4-209ENST00000465132 OR13C5Q8NGS8 318 aa14.68□□□□□ -0.06
CPSF4-209ENST00000465132 OR10Z1Q8NGY1 313 aa14.68□□□□□ -0.06
CPSF4-209ENST00000465132 HPSE2Q8WWQ2 592 aa14.68□□□□□ -0.06
CPSF4-209ENST00000465132 CCL17Q92583 94 aa14.68□□□□□ -0.06
CPSF4-209ENST00000465132 C1orf159Q96HA4 380 aa14.68□□□□□ -0.06
CPSF4-209ENST00000465132 TLNRD1Q9H1K6 362 aa14.68□□□□□ -0.06
CPSF4-209ENST00000465132 TAS2R4Q9NYW5 299 aa14.68□□□□□ -0.06
CPSF4-209ENST00000465132 RNF7Q9UBF6 113 aa14.68□□□□□ -0.06
CPSF4-209ENST00000465132 hCG_1807616A0A1W2PRN6 198 aa14.67□□□□□ -0.06
CPSF4-209ENST00000465132 LYNX1G3V0Z9 82 aa14.67□□□□□ -0.06
CPSF4-209ENST00000465132 J3QT63 122 aa14.67□□□□□ -0.06
CPSF4-209ENST00000465132 LYNX1P0DP58 116 aa14.67□□□□□ -0.06
CPSF4-209ENST00000465132 IGFBP3P17936 291 aaPredicted RBP14.67□□□□□ -0.06
CPSF4-209ENST00000465132 SRP14P37108 136 aaKnown RBP14.67□□□□□ -0.06
CPSF4-209ENST00000465132 HAAOP46952 286 aa14.67□□□□□ -0.06
CPSF4-209ENST00000465132 CAPZA1P52907 286 aa14.67□□□□□ -0.06
CPSF4-209ENST00000465132 FABP5Q01469 135 aa14.67□□□□□ -0.06
CPSF4-209ENST00000465132 ZNF154Q13106 437 aa14.67□□□□□ -0.06
CPSF4-209ENST00000465132 OR13F1Q8NGS4 319 aa14.67□□□□□ -0.06
CPSF4-209ENST00000465132 TRMT10AQ8TBZ6 339 aaKnown RBP14.67□□□□□ -0.06
CPSF4-209ENST00000465132 DVL3Q92997 716 aaPredicted RBP14.67□□□□□ -0.06
CPSF4-209ENST00000465132 KCTD7Q96MP8 289 aa14.67□□□□□ -0.06
CPSF4-209ENST00000465132 OR51I2Q9H344 312 aa14.67□□□□□ -0.06
CPSF4-209ENST00000465132 TMEM106BQ9NUM4 274 aa14.67□□□□□ -0.06
CPSF4-209ENST00000465132 C1orf123Q9NWV4 160 aa14.67□□□□□ -0.06
CPSF4-209ENST00000465132 RASL12Q9NYN1 266 aa14.67□□□□□ -0.06
CPSF4-209ENST00000465132 NPTNQ9Y639 398 aa14.67□□□□□ -0.06
CPSF4-209ENST00000465132 TANC2Q9HCD6 1990 aa14.67□□□□□ -0.06
CPSF4-209ENST00000465132 DYSFO75923 2080 aa14.67□□□□□ -0.06
CPSF4-209ENST00000465132 TRAV1-2A0A0B4J238 106 aa14.66□□□□□ -0.06
CPSF4-209ENST00000465132 NOL3O60936 208 aaKnown RBP14.66□□□□□ -0.06
CPSF4-209ENST00000465132 NCR1O76036 304 aa14.66□□□□□ -0.06
CPSF4-209ENST00000465132 FSTL3O95633 263 aa14.66□□□□□ -0.06
CPSF4-209ENST00000465132 ACAA1P09110 424 aaPredicted RBP14.66□□□□□ -0.06
CPSF4-209ENST00000465132 CPT2P23786 658 aa14.66□□□□□ -0.06
CPSF4-209ENST00000465132 CALRP27797 417 aaKnown RBP14.66□□□□□ -0.06
CPSF4-209ENST00000465132 ZNF93P35789 620 aaPredicted RBP14.66□□□□□ -0.06
CPSF4-209ENST00000465132 BMXP51813 675 aa14.66□□□□□ -0.06
CPSF4-209ENST00000465132 DVL1P1P54792 670 aaPredicted RBP14.66□□□□□ -0.06
CPSF4-209ENST00000465132 IL24Q13007 206 aa14.66□□□□□ -0.06
CPSF4-209ENST00000465132 KISS1Q15726 138 aa14.66□□□□□ -0.06
CPSF4-209ENST00000465132 DDI2Q5TDH0 399 aa14.66□□□□□ -0.06
CPSF4-209ENST00000465132 FIP1L1Q6UN15 594 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms