RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 YIF1AO95070 293 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 IGHV4-34P06331 123 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 PGA4P0DJD7 388 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 PGA3P0DJD8 388 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 DUSP1P28562 367 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 PPP1CCP36873 323 aaKnown RBP6.39□□□□□ -1.39
USP48-206ENST00000464577 FHITP49789 147 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 BLKP51451 505 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 CCR5P51681 352 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 AFF3P51826 1226 aaKnown RBP6.39□□□□□ -1.39
USP48-206ENST00000464577 CLRN1P58418 232 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 TFF2Q03403 129 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 C17orf67Q0P5P2 114 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 C1orf61Q13536 156 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 LCN10Q6JVE6 187 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 LIAT1Q6ZQX7 453 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 Q6ZSR3 168 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 GALNTL5Q7Z4T8 443 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 ZNF383Q8NA42 475 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 SH3BGRL3Q9H299 93 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 ZNF701Q9NV72 531 aaPredicted RBP6.39□□□□□ -1.39
USP48-206ENST00000464577 GFOD1Q9NXC2 390 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 DOK5Q9P104 306 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 ANXA10Q9UJ72 324 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 MCTS1Q9ULC4 181 aaKnown RBP6.39□□□□□ -1.39
USP48-206ENST00000464577 PUS1Q9Y606 427 aaKnown RBP eCLIP6.39□□□□□ -1.39
USP48-206ENST00000464577 IGHV5-51A0A0C4DH38 117 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 RBFOX3A6NFN3 312 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 VSTM2BA6NLU5 285 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 ST8SIA3O43173 380 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 C1QL1O75973 258 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 IFNA10P01566 189 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 KLK3P07288 261 aaPredicted RBP6.38□□□□□ -1.39
USP48-206ENST00000464577 THEGLP0DJG4 465 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 ZNF728P0DKX0 622 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 OR5H8P0DN80 308 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 FOSL2P15408 326 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 HIST1H1BP16401 226 aaKnown RBP6.38□□□□□ -1.39
USP48-206ENST00000464577 DTYMKP23919 212 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 EFNA3P52797 238 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 PIGPP57054 158 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 MRPS21P82921 87 aaKnown RBP6.38□□□□□ -1.39
USP48-206ENST00000464577 FOXF1Q12946 379 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 C14orf28Q4W4Y0 310 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 SLC25A53Q5H9E4 307 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 TMEM31Q5JXX7 168 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 SP5Q6BEB4 398 aaPredicted RBP6.38□□□□□ -1.39
USP48-206ENST00000464577 PLXDC2Q6UX71 529 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 TMEM182Q6ZP80 229 aaPredicted RBP6.38□□□□□ -1.39
USP48-206ENST00000464577 TTLL10Q6ZVT0 673 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 FAM57BQ71RH2 274 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 C1QL2Q7Z5L3 287 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 UEVLDQ8IX04 471 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 LGI3Q8N145 548 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 ZNF283Q8N7M2 679 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 APCDD1LQ8NCL9 501 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 FAM213BQ8TBF2 198 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.38□□□□□ -1.39
USP48-206ENST00000464577 PP6455Q8WZ26 134 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 RELTQ969Z4 430 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 SLAMF9Q96A28 289 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 C10orf35Q96D05 121 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 Q96M66 194 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 SPSB2Q99619 263 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 WDR77Q9BQA1 342 aaPredicted RBP6.38□□□□□ -1.39
USP48-206ENST00000464577 RPP25Q9BUL9 199 aaKnown RBP6.38□□□□□ -1.39
USP48-206ENST00000464577 EMC6Q9BV81 110 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 LRRC61Q9BV99 259 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 UFSP2Q9NUQ7 469 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 NECAP2Q9NVZ3 263 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 KIAA1456Q9P272 454 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 V9GYS6 101 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 DOCK8Q8NF50 2099 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 A0A0U1RQV5 110 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 H3BQ15 152 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 STMND1H3BQB6 276 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 HSD17B6O14756 317 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 TGOLN2O43493 480 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 XRCC2O43543 280 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 TRAF3IP2O43734 574 aaPredicted RBP6.38□□□□□ -1.39
USP48-206ENST00000464577 PITX3O75364 302 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 HSPB1P04792 205 aaKnown RBP6.38□□□□□ -1.39
USP48-206ENST00000464577 SRP19P09132 144 aaKnown RBP6.38□□□□□ -1.39
USP48-206ENST00000464577 OR5AC1P0C628 307 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 SERPINA2P20848 420 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 CTHP32929 405 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 RBP2P50120 134 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 GFERP55789 205 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 NDUFA6P56556 154 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 EWSR1Q01844 656 aaKnown RBP eCLIP6.38□□□□□ -1.39
USP48-206ENST00000464577 ZNF266Q14584 549 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 ELOBQ15370 118 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 NSDHLQ15738 373 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 ABCA11PQ4W5N1 156 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 KIAA0895LQ68EN5 471 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 SPSB3Q6PJ21 355 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 CLEC9AQ6UXN8 241 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 FBXW12Q6X9E4 464 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 HSD17B11Q8NBQ5 300 aa6.38□□□□□ -1.39
USP48-206ENST00000464577 OR4D5Q8NGN0 318 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms