RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 PNLDC1Q8NA58 520 aaKnown RBP8.61□□□□□ -1.03
PTPRD-207ENST00000463477 CHST4Q8NCG5 386 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 PGAM5Q96HS1 289 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 ZNF385AQ96PM9 386 aaKnown RBP8.61□□□□□ -1.03
PTPRD-207ENST00000463477 CITED4Q96RK1 184 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 UCN2Q96RP3 112 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 OCSTAMPQ9BR26 566 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 TMEM59Q9BXS4 323 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 CHST5Q9GZS9 411 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 CST11Q9H112 138 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 CALHM2Q9HA72 323 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 IFT46Q9NQC8 304 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 KCNN3Q9UGI6 736 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 VSIG4Q9Y279 399 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 A0A0A6YYD4 124 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 IGKV1-9A0A0C4DH69 117 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 FOXI3A8MTJ6 420 aaPredicted RBP8.6□□□□□ -1.03
PTPRD-207ENST00000463477 MFNGO00587 321 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 RP2O75695 350 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 CFDP00746 253 aaPredicted RBP8.6□□□□□ -1.03
PTPRD-207ENST00000463477 CST2P09228 141 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 SLC25A4P12235 298 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 HIST1H1DP16402 221 aaKnown RBP8.6□□□□□ -1.03
PTPRD-207ENST00000463477 ZNF708P17019 499 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 CHRNB4P30926 498 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 TIMP3P35625 211 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 STARP49675 285 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 ZNF345Q14585 488 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 PPA1Q15181 289 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 PHYHD1Q5SRE7 291 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 RIPPLY2Q5TAB7 128 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 DCAF12L2Q5VW00 463 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 SEM1Q6ZVN7 128 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 SLC16A14Q7RTX9 510 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 COMMD2Q86X83 199 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 GPR137CQ8N3F9 429 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 OR52H1Q8NGJ2 320 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 OR6K3Q8NGY3 331 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 MITD1Q8WV92 249 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 SPTSSAQ969W0 71 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 MRGPRFQ96AM1 343 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 RAB3CQ96E17 227 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 FAM71F1Q96KD3 344 aaPredicted RBP8.6□□□□□ -1.03
PTPRD-207ENST00000463477 TM2D1Q9BX74 207 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 ULBP2Q9BZM5 246 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 SELENOIQ9C0D9 397 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 ZMAT3Q9HA38 289 aaKnown RBP8.6□□□□□ -1.03
PTPRD-207ENST00000463477 ZNF224Q9NZL3 707 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 KCNK7Q9Y2U2 307 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 CENPEQ02224 2701 aa8.6□□□□□ -1.03
PTPRD-207ENST00000463477 A0A0D9SG52 128 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 SMAD9O15198 467 aaKnown RBP8.59□□□□□ -1.03
PTPRD-207ENST00000463477 SIX6O95475 246 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 FCER2P06734 321 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 HCKP08631 526 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 SLC2A1P11166 492 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 GNB3P16520 340 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 ENPP1P22413 925 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 CRYGSP22914 178 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 CD34P28906 385 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 CEACAM8P31997 349 aaPredicted RBP8.59□□□□□ -1.03
PTPRD-207ENST00000463477 OR3A4PP47883 348 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 CLDN18P56856 261 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 RPS27AP62979 156 aaKnown RBP8.59□□□□□ -1.03
PTPRD-207ENST00000463477 RAB35Q15286 201 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 CDSNQ15517 529 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 RSPO1Q2MKA7 263 aaPredicted RBP8.59□□□□□ -1.03
PTPRD-207ENST00000463477 KRTAP27-1Q3LI81 207 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 ACSF3Q4G176 576 aaPredicted RBP8.59□□□□□ -1.03
PTPRD-207ENST00000463477 SP5Q6BEB4 398 aaPredicted RBP8.59□□□□□ -1.03
PTPRD-207ENST00000463477 ABLIM2Q6H8Q1 611 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 LIN54Q6MZP7 749 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 C11orf88Q6PI97 169 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 CRIP3Q6Q6R5 217 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 DRAM2Q6UX65 266 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 RFPL4BQ6ZWI9 263 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 HOGA1Q86XE5 327 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 CCDC28AQ8IWP9 274 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 STEAP2Q8NFT2 490 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 OR4S1Q8NGB4 309 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 SCARB1Q8WTV0 552 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 CA5BP1Q8WTZ4 195 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 NUDCD2Q8WVJ2 157 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 CMBLQ96DG6 245 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 WDR89Q96FK6 387 aaPredicted RBP8.59□□□□□ -1.03
PTPRD-207ENST00000463477 LYZL4Q96KX0 146 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 GAL3ST1Q99999 423 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 SOX7Q9BT81 388 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 MYEF2Q9P2K5 600 aaKnown RBP8.59□□□□□ -1.03
PTPRD-207ENST00000463477 ZNF391Q9UJN7 358 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 TRAV14DV4A0A0A6YYC5 116 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 A0A0B4J2A0 478 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 A0A0G2JNJ9 132 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 C9orf170A2RU37 121 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 MBD3L4A6NDZ8 208 aaPredicted RBP8.59□□□□□ -1.03
PTPRD-207ENST00000463477 MBD3L3A6NE82 208 aaPredicted RBP8.59□□□□□ -1.03
PTPRD-207ENST00000463477 MBD3L5A6NJ08 208 aaPredicted RBP8.59□□□□□ -1.03
PTPRD-207ENST00000463477 ZNF716A6NP11 495 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 M0R135 149 aa8.59□□□□□ -1.03
PTPRD-207ENST00000463477 TNFSF11O14788 317 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms