RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 C10orf35Q96D05 121 aa13.42□□□□□ -0.26
COL1A1-202ENST00000463440 SIRPDQ9H106 197 aa13.42□□□□□ -0.26
COL1A1-202ENST00000463440 ZMAT3Q9HA38 289 aaKnown RBP13.42□□□□□ -0.26
COL1A1-202ENST00000463440 SLC25A10Q9UBX3 287 aaPredicted RBP13.42□□□□□ -0.26
COL1A1-202ENST00000463440 KPTNQ9Y664 436 aa13.42□□□□□ -0.26
COL1A1-202ENST00000463440 IGKV1D-17A0A075B6S4 117 aa13.41□□□□□ -0.26
COL1A1-202ENST00000463440 J3QLW9 94 aa13.41□□□□□ -0.26
COL1A1-202ENST00000463440 FADS2O95864 444 aaKnown RBP13.41□□□□□ -0.26
COL1A1-202ENST00000463440 HTR1AP08908 422 aa13.41□□□□□ -0.26
COL1A1-202ENST00000463440 PGA5P0DJD9 388 aa13.41□□□□□ -0.26
COL1A1-202ENST00000463440 PSG2P11465 335 aa13.41□□□□□ -0.26
COL1A1-202ENST00000463440 SELLP14151 372 aa13.41□□□□□ -0.26
COL1A1-202ENST00000463440 ZNF19P17023 458 aa13.41□□□□□ -0.26
COL1A1-202ENST00000463440 FDX2Q6P4F2 183 aa13.41□□□□□ -0.26
COL1A1-202ENST00000463440 BRD3OSQ6XYD6 125 aa13.41□□□□□ -0.26
COL1A1-202ENST00000463440 ACP7Q6ZNF0 438 aa13.41□□□□□ -0.26
COL1A1-202ENST00000463440 CMTM4Q8IZR5 234 aa13.41□□□□□ -0.26
COL1A1-202ENST00000463440 LY6G5BQ8NDX9 201 aa13.41□□□□□ -0.26
COL1A1-202ENST00000463440 TRMT10AQ8TBZ6 339 aaKnown RBP13.41□□□□□ -0.26
COL1A1-202ENST00000463440 GCDHQ92947 438 aaPredicted RBP13.41□□□□□ -0.26
COL1A1-202ENST00000463440 ZNF48Q96MX3 618 aaPredicted RBP13.41□□□□□ -0.26
COL1A1-202ENST00000463440 TBX15Q96SF7 602 aa13.41□□□□□ -0.26
COL1A1-202ENST00000463440 DCTN5Q9BTE1 182 aa13.41□□□□□ -0.26
COL1A1-202ENST00000463440 CHST5Q9GZS9 411 aa13.41□□□□□ -0.26
COL1A1-202ENST00000463440 ONECUT1Q9UBC0 465 aa13.41□□□□□ -0.26
COL1A1-202ENST00000463440 RPL36Q9Y3U8 105 aaKnown RBP13.41□□□□□ -0.26
COL1A1-202ENST00000463440 FAM230AA0A1W2PPH8 454 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 DNAJC9-AS1A6NH13 148 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 SYNGR1O43759 233 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 NOS1APO75052 506 aaPredicted RBP13.4□□□□□ -0.26
COL1A1-202ENST00000463440 NXPH2O95156 264 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 TFF1P04155 84 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 NDUFB7P17568 137 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 PRTN3P24158 256 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 MPZP25189 248 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 CCR9P51686 369 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 FUT6P51993 359 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 CAV3P56539 151 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 RAB40BQ12829 278 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 GALEQ14376 348 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 UBE2V2Q15819 145 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 DGUOKQ16854 277 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 C12orf54Q6X4T0 127 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 EGFL6Q8IUX8 553 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 RDH10Q8IZV5 341 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 KIR3DL3Q8N743 410 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 C8orf46Q8TAG6 207 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 NPRL2Q8WTW4 380 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 GATAD2BQ8WXI9 593 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 PP6455Q8WZ26 134 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 RNF166Q96A37 237 aaPredicted RBP13.4□□□□□ -0.26
COL1A1-202ENST00000463440 PELI1Q96FA3 418 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 C4orf36Q96KX1 117 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 ZNF488Q96MN9 340 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 ALG8Q9BVK2 526 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 PKIBQ9C010 78 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 AMBNQ9NP70 447 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 C8orf4Q9NR00 106 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 INPP5EQ9NRR6 644 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 FRRS1LQ9P0K9 344 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 ZNF222Q9UK12 451 aa13.4□□□□□ -0.26
COL1A1-202ENST00000463440 CENPVL3A0A0U1RRI6 287 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 RFPL4AA6NLU0 287 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 RFPL4AL1F8VTS6 287 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 IGHA1P01876 353 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 ISG15P05161 165 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 IL24Q13007 206 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 CNN3Q15417 329 aaKnown RBP13.39□□□□□ -0.27
COL1A1-202ENST00000463440 LRRC36Q1X8D7 754 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 KLHL22Q53GT1 634 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 LHFPL3Q86UP9 236 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 ANGPTL5Q86XS5 388 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 CALHM1Q8IU99 346 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 SYS1Q8N2H4 156 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 ZNRF1Q8ND25 227 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 TMEM185AQ8NFB2 350 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 LHX4Q969G2 390 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 ZDHHC16Q969W1 377 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 SLC25A28Q96A46 364 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 BORCS8Q96FH0 119 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 SDSLQ96GA7 329 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 NRIP2Q9BQI9 281 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 MYRFQ9Y2G1 1151 aa13.39□□□□□ -0.27
COL1A1-202ENST00000463440 SOX21Q9Y651 276 aaPredicted RBP13.39□□□□□ -0.27
COL1A1-202ENST00000463440 IGHV1-69DA0A0B4J2H0 117 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 A0A1W2PQ09 198 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 TMEM89A2RUT3 159 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 SLC1A7O00341 560 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 IGHV1-69P01742 117 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 ZNF20P17024 532 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 CAPZA1P52907 286 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 NANOS3P60323 173 aaKnown RBP13.38□□□□□ -0.27
COL1A1-202ENST00000463440 MRPL28Q13084 256 aaKnown RBP13.38□□□□□ -0.27
COL1A1-202ENST00000463440 ALKBH1Q13686 389 aaKnown RBP13.38□□□□□ -0.27
COL1A1-202ENST00000463440 RCN1Q15293 331 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 DEFB112Q30KQ8 113 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 LPCAT4Q643R3 524 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 RUSC1-AS1Q66K80 236 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 VMO1Q7Z5L0 202 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 ZNF561Q8N587 486 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms