RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 SGCDQ92629 289 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 RPL3LQ92901 407 aaKnown RBP5.37□□□□□ -1.55
SF3B1-206ENST00000462613 RNF166Q96A37 237 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-206ENST00000462613 C12orf43Q96C57 262 aaKnown RBP5.37□□□□□ -1.55
SF3B1-206ENST00000462613 NEIL1Q96FI4 390 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-206ENST00000462613 COX4I2Q96KJ9 171 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 PGLYRP3Q96LB9 341 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 OR14A2Q96R54 314 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 OR8B2Q96RD0 313 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 FAM192AQ9GZU8 254 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 OR51I2Q9H344 312 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 ELL3Q9HB65 397 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-206ENST00000462613 RHOFQ9HBH0 211 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 SMURF1Q9HCE7 757 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 GSTK1Q9Y2Q3 226 aa5.37□□□□□ -1.55
SF3B1-206ENST00000462613 LSM2Q9Y333 95 aaKnown RBP5.37□□□□□ -1.55
SF3B1-206ENST00000462613 FLNAP21333 2647 aaKnown RBP5.37□□□□□ -1.55
SF3B1-206ENST00000462613 MAP1AP78559 2803 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-206ENST00000462613 DSCAML1Q8TD84 2053 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 IGHV4-61A0A0C4DH41 118 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 TRBV5-5A0A0J9YX44 114 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 CEACAM18A8MTB9 384 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 SRRM5B3KS81 715 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 TMPRSS2O15393 492 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 AKR7A2O43488 359 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 ADAM20O43506 726 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 LMX1BO60663 402 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 ZNF780AO75290 641 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-206ENST00000462613 CSTBP04080 98 aaKnown RBP5.36□□□□□ -1.55
SF3B1-206ENST00000462613 MAS1P04201 325 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 MPZP25189 248 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 ZNF93P35789 620 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-206ENST00000462613 PSMD7P51665 324 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 GMFBP60983 142 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 GPR176Q14439 515 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 ZMYND11Q15326 602 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 RSU1Q15404 277 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 KISS1Q15726 138 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 TMEM249Q2WGJ8 235 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 ZNF404Q494X3 552 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 ACSM3Q53FZ2 586 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 HSD17B12Q53GQ0 312 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 LRRC10Q5BKY1 277 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 DMRTC1Q5HYR2 192 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 UBE2UQ5VVX9 321 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 GLT8D1Q68CQ7 371 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 SFRP4Q6FHJ7 346 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-206ENST00000462613 FAM166AQ6J272 317 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 CLEC9AQ6UXN8 241 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 SLC25A26Q70HW3 274 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 CEACAM19Q7Z692 300 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 WDR86Q86TI4 376 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 GLCCI1Q86VQ1 547 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 FAM90A1Q86YD7 464 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 PHC2Q8IXK0 858 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 SAXO1Q8IYX7 474 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 JAGN1Q8N5M9 183 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 GCSAMQ8N6F7 178 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 LINC01356Q8N9X3 169 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 ZSCAN4Q8NAM6 433 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-206ENST00000462613 POC1AQ8NBT0 407 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 DEFB108BQ8NET1 73 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 OR51F2Q8NH61 342 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 PPP1R35Q8TAP8 253 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 EMG1Q92979 244 aaKnown RBP5.36□□□□□ -1.55
SF3B1-206ENST00000462613 TMEM203Q969S6 136 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 FOXRED1Q96CU9 486 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-206ENST00000462613 MED30Q96HR3 178 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 CEP19Q96LK0 163 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 DERL3Q96Q80 235 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 TMUB1Q9BVT8 246 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 DNTTIP1Q9H147 329 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 ZNF665Q9H7R5 613 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 PATZ1Q9HBE1 687 aaKnown RBP5.36□□□□□ -1.55
SF3B1-206ENST00000462613 EXOSC4Q9NPD3 245 aaKnown RBP5.36□□□□□ -1.55
SF3B1-206ENST00000462613 NOX4Q9NPH5 578 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 TAS2R4Q9NYW5 299 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 NLKQ9UBE8 527 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 CLN8Q9UBY8 286 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 OR5V1Q9UGF6 321 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 KCNS2Q9ULS6 477 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 SSR3Q9UNL2 185 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 SIRT4Q9Y6E7 314 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-206ENST00000462613 ARHGAP32A7KAX9 2087 aa5.36□□□□□ -1.55
SF3B1-206ENST00000462613 MAST4O15021 2626 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 F8P00451 2351 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 TRAV20A0A0B4J274 112 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 IGKV1-9A0A0C4DH69 117 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 A0A1W2PPK0 400 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 OR2AT4A6NND4 320 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 H3BUI4 141 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 GABRPO00591 440 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 PDCD5O14737 125 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 GPR37O15354 613 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 NDUFB3O43676 98 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 SYNGR1O43759 233 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 CD5LO43866 347 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 NOS1APO75052 506 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-206ENST00000462613 GPX5O75715 221 aa5.35□□□□□ -1.55
SF3B1-206ENST00000462613 RHBDL1O75783 438 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms