RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 NKX6-3A6NJ46 265 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 CENPXA8MT69 81 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 LINC00587B1AMM8 73 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 C17orf105B2RV13 164 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 D6RAR5 112 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 PRSS46E5RG02 174 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 CLDN34H7C241 214 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 M0R3G1 203 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 CDC7O00311 574 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 BTN3A3O00478 584 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 NUPL2O15504 423 aaKnown RBP3.11□□□□□ -1.91
UBA3-204ENST00000461522 AIREO43918 545 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 HSBP1O75506 76 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 SC5DO75845 299 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 PIAS1O75925 651 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 TNFAIP8O95379 198 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 UTS2O95399 124 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 ATP6V1G2O95670 118 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 TXNDC12O95881 172 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 RENP00797 406 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 TCRBP04435 133 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 PPIAL4GP0DN37 164 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 THRAP10827 490 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 MYL2P10916 166 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 NELFEP18615 380 aaKnown RBP3.11□□□□□ -1.91
UBA3-204ENST00000461522 NPR2P20594 1047 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 C4BPBP20851 252 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 IMPA1P29218 277 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 CMPK1P30085 196 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 SLCO1A2P46721 670 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 CYB561P49447 251 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 SRP9P49458 86 aaKnown RBP3.11□□□□□ -1.91
UBA3-204ENST00000461522 ATP1B3P54709 279 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 KCNK10P57789 538 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 ERVPABLB-1P60509 514 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 UBE2KP61086 200 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 PSPHP78330 225 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 SRPXP78539 464 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 HPCAP84074 193 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 VLDLRP98155 873 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 AESQ08117 197 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 FAM53BQ14153 422 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 TSNQ15631 228 aaKnown RBP3.11□□□□□ -1.91
UBA3-204ENST00000461522 LTB4RQ15722 352 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 ISXQ2M1V0 245 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 GGTA1PQ4G0N0 100 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 GCSAMLQ5JQS6 135 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 SPIN3Q5JUX0 258 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 SAMD4BQ5PRF9 694 aaKnown RBP3.11□□□□□ -1.91
UBA3-204ENST00000461522 ACER2Q5QJU3 275 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 UTF1Q5T230 341 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 C9orf66Q5T8R8 295 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 AGAP7PQ5VUJ5 663 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 TRIQKQ629K1 86 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 STUMQ69YW2 141 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 FRMPD2BQ6IN97 320 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 ZFP1Q6P2D0 407 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 GUSBP11Q6P575 273 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 SPESP1Q6UW49 350 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 ZNF621Q6ZSS3 439 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 ABHD13Q7L211 337 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 HDDC2Q7Z4H3 204 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 CMC1Q7Z7K0 106 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 DHDDSQ86SQ9 333 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 CALHM1Q8IU99 346 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.11□□□□□ -1.91
UBA3-204ENST00000461522 PUSL1Q8N0Z8 303 aaKnown RBP3.11□□□□□ -1.91
UBA3-204ENST00000461522 ZNF561Q8N587 486 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 CDRT4Q8N9R6 151 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 LINC01555Q8NAE3 123 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 MFSD9Q8NBP5 474 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 ZNF738Q8NE65 137 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 SDR9C7Q8NEX9 313 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 PXT1Q8NFP0 134 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 OR4E2Q8NGC2 313 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 OR4D5Q8NGN0 318 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 OR4A4PQ8NGN8 299 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 OR5AR1Q8NGP9 310 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 OR1L6Q8NGR2 347 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 OR13C5Q8NGS8 318 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 OR6N2Q8NGY6 317 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 RHOXF1Q8NHV9 184 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 SKA2Q8WVK7 121 aaPredicted RBP3.11□□□□□ -1.91
UBA3-204ENST00000461522 HIST1H2ACQ93077 130 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 CMTM5Q96DZ9 223 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 PRAP1Q96NZ9 151 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 NEDD4LQ96PU5 975 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 SLC38A2Q96QD8 506 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 IL4I1Q96RQ9 567 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 EFCAB11Q9BUY7 163 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 ZNF717Q9BY31 904 aaPredicted RBP3.11□□□□□ -1.91
UBA3-204ENST00000461522 MRPS26Q9BYN8 205 aaKnown RBP3.11□□□□□ -1.91
UBA3-204ENST00000461522 NMUR2Q9GZQ4 415 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 SYT4Q9H2B2 425 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 ALG9Q9H6U8 611 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 EML4Q9HC35 981 aaKnown RBP3.11□□□□□ -1.91
UBA3-204ENST00000461522 FAIMQ9NVQ4 179 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 C1orf109Q9NX04 203 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 GIN1Q9NXP7 522 aa3.11□□□□□ -1.91
UBA3-204ENST00000461522 TMEM216Q9P0N5 145 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms