RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 SRPXP78539 464 aa12.77□□□□□ -0.36
NCL-207ENST00000461347 RNF212Q495C1 297 aa12.77□□□□□ -0.36
NCL-207ENST00000461347 TEX30Q5JUR7 227 aa12.77□□□□□ -0.36
NCL-207ENST00000461347 FDX2Q6P4F2 183 aa12.77□□□□□ -0.36
NCL-207ENST00000461347 HOGA1Q86XE5 327 aa12.77□□□□□ -0.36
NCL-207ENST00000461347 AKR7LQ8NHP1 331 aa12.77□□□□□ -0.36
NCL-207ENST00000461347 UTP23Q9BRU9 249 aaKnown RBP12.77□□□□□ -0.36
NCL-207ENST00000461347 PLXNB3Q9ULL4 1909 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 LIPT2A6NK58 231 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 ZNF705GA8MUZ8 300 aaPredicted RBP12.77□□□□□ -0.37
NCL-207ENST00000461347 SYNGR4O95473 234 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 NRASP01111 189 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 THBS4P35443 961 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 NAAAQ02083 359 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 PLAURQ03405 335 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 OR2A2Q6IF42 318 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 YRDCQ86U90 279 aaKnown RBP12.77□□□□□ -0.37
NCL-207ENST00000461347 PSMF1Q92530 271 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 SGK3Q96BR1 496 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 VWCEQ96DN2 955 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 OR10C1Q96KK4 312 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 HDHD3Q9BSH5 251 aaPredicted RBP12.77□□□□□ -0.37
NCL-207ENST00000461347 GFOD1Q9NXC2 390 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 STRAPQ9Y3F4 350 aaKnown RBP12.77□□□□□ -0.37
NCL-207ENST00000461347 CACNA1DQ01668 2161 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 HBE1P02100 147 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 C4orf17Q53FE4 359 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 SHEQ5VZ18 495 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 DRAM2Q6UX65 266 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 ZNF519Q8TB69 540 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 OIT3Q8WWZ8 545 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 RBMXL1Q96E39 390 aaKnown RBP12.77□□□□□ -0.37
NCL-207ENST00000461347 ALKBH3Q96Q83 286 aaPredicted RBP12.77□□□□□ -0.37
NCL-207ENST00000461347 PECRQ9BY49 303 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 GNG13Q9P2W3 67 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 GPR132Q9UNW8 380 aa12.77□□□□□ -0.37
NCL-207ENST00000461347 ONECUT2O95948 504 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 IFI6P09912 130 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 LCN15Q6UWW0 184 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 SLC25A26Q70HW3 274 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 G6PC2Q9NQR9 355 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 CACNA1EQ15878 2313 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 MPTX1A8MV57 137 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 DHRS3O75911 302 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 LY86O95711 162 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 B4GALT1P15291 398 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 GDF1P27539 372 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 GSK3AP49840 483 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 ZNF100Q8IYN0 542 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 CCDC54Q8NEL0 328 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 GNRHR2Q96P88 292 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 KLHDC3Q9BQ90 382 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 GPR137BO60478 399 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 GALNSP34059 522 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 ZNF239Q16600 458 aaKnown RBP12.76□□□□□ -0.37
NCL-207ENST00000461347 ANKRD55Q3KP44 614 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 PABPC1L2AQ5JQF8 200 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 AADACL3Q5VUY0 350 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 OR8U1Q8NH10 309 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 NINJ1Q92982 152 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 SSX3Q99909 188 aa12.76□□□□□ -0.37
NCL-207ENST00000461347 GPR37O15354 613 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 TSPAN2O60636 221 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 GLB1P16278 677 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 SSR4P51571 173 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 CARD18P57730 90 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 PCBD1P61457 104 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 UNC119Q13432 240 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 SSX2Q16385 188 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 NCMAPQ5T1S8 102 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 C5orf66Q9H5L9 145 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 ABI3Q9P2A4 366 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 HDGFL3Q9Y3E1 203 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 SMCO3A2RU48 225 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 TSTD3H0UI37 97 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 C1QL1O75973 258 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 VAMP5O95183 116 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 LPAR6P43657 344 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 EIF4E3Q8N5X7 224 aaKnown RBP12.75□□□□□ -0.37
NCL-207ENST00000461347 OR13G1Q8NGZ3 307 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 ADIPOR1Q96A54 375 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 LANCL2Q9NS86 450 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 RALGAPA1Q6GYQ0 2036 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 A0A1W2PPE2 198 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 FAM24AA6NFZ4 105 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 PATE4P0C8F1 98 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 C9orf152Q5JTZ5 239 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 C15orf54Q8N8G6 183 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 SPACA9Q96E40 222 aaPredicted RBP12.75□□□□□ -0.37
NCL-207ENST00000461347 PIGQQ9BRB3 760 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 RTN4RQ9BZR6 473 aa12.75□□□□□ -0.37
NCL-207ENST00000461347 MRPL33O75394 65 aaKnown RBP12.74□□□□□ -0.37
NCL-207ENST00000461347 TCN2P20062 427 aa12.74□□□□□ -0.37
NCL-207ENST00000461347 CALCRP30988 508 aa12.74□□□□□ -0.37
NCL-207ENST00000461347 IGLV3-21P80748 117 aaPredicted RBP12.74□□□□□ -0.37
NCL-207ENST00000461347 TESK1Q15569 626 aa12.74□□□□□ -0.37
NCL-207ENST00000461347 RPS19BP1Q86WX3 136 aaKnown RBP12.74□□□□□ -0.37
NCL-207ENST00000461347 SUCNR1Q9BXA5 334 aa12.74□□□□□ -0.37
NCL-207ENST00000461347 SLC35B3Q9H1N7 401 aa12.74□□□□□ -0.37
NCL-207ENST00000461347 SLC26A1Q9H2B4 701 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms