RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 IL13RA1P78552 427 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 BAMBIQ13145 260 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 SMIM21Q3B7S5 101 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 KLHL22Q53GT1 634 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 ZNF691Q5VV52 312 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 TTC23Q5W5X9 447 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 Q6ZSR3 168 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 BATF2Q8N1L9 274 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 FGFRL1Q8N441 504 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 ZNF676Q8N7Q3 588 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 POC1AQ8NBT0 407 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 SETD9Q8NE22 299 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 OR52I1Q8NGK6 324 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 APH1BQ8WW43 257 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 PELI1Q96FA3 418 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 MED30Q96HR3 178 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 ZNF48Q96MX3 618 aaPredicted RBP12.74□□□□□ -0.37
VARS-219ENST00000461328 DUX5Q96PT3 197 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 CHST5Q9GZS9 411 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 DNTTIP1Q9H147 329 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 VCXQ9H320 206 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 FRRS1LQ9P0K9 344 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 ONECUT1Q9UBC0 465 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 MYRFQ9Y2G1 1151 aa12.74□□□□□ -0.37
VARS-219ENST00000461328 DNAJC9-AS1A6NH13 148 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 ZNF879B4DU55 563 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 TOX4O94842 621 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 NXPH2O95156 264 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 PLATP00750 562 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 IGHA1P01876 353 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 NDUFB7P17568 137 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 CAPZA1P52907 286 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 NANOS3P60323 173 aaKnown RBP12.73□□□□□ -0.37
VARS-219ENST00000461328 ALKBH1Q13686 389 aaKnown RBP12.73□□□□□ -0.37
VARS-219ENST00000461328 CNN3Q15417 329 aaKnown RBP12.73□□□□□ -0.37
VARS-219ENST00000461328 SMN1Q16637 294 aaKnown RBP12.73□□□□□ -0.37
VARS-219ENST00000461328 TUSC1Q2TAM9 212 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 GPR157Q5UAW9 335 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 C9orf139Q6ZV77 190 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 SYS1Q8N2H4 156 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 DHRSXQ8N5I4 330 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 TMEM185AQ8NFB2 350 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 OR13C3Q8NGS6 347 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 ANGPTL6Q8NI99 470 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 CNIH3Q8TBE1 160 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 PP6455Q8WZ26 134 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 C10orf35Q96D05 121 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 BORCS8Q96FH0 119 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 ZNF488Q96MN9 340 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 GAFA1Q96PS6 74 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 ERVK13-1Q9NX77 482 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 RASL12Q9NYN1 266 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 SLC25A10Q9UBX3 287 aaPredicted RBP12.73□□□□□ -0.37
VARS-219ENST00000461328 RPUSD1Q9UJJ7 312 aaKnown RBP12.73□□□□□ -0.37
VARS-219ENST00000461328 DOCK11Q5JSL3 2073 aa12.73□□□□□ -0.37
VARS-219ENST00000461328 IRGMA1A4Y4 181 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 SIGLEC5O15389 551 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 FCN3O75636 299 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 SFTPBP07988 381 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 PGA5P0DJD9 388 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 PSG2P11465 335 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 PRTN3P24158 256 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 COMPP49747 757 aaPredicted RBP12.72□□□□□ -0.37
VARS-219ENST00000461328 CCR9P51686 369 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 GBX2P52951 348 aaPredicted RBP12.72□□□□□ -0.37
VARS-219ENST00000461328 ARF6P62330 175 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 GABPB1Q06547 395 aaPredicted RBP12.72□□□□□ -0.37
VARS-219ENST00000461328 UBE2V2Q15819 145 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 DGUOKQ16854 277 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 C11orf91Q3C1V1 193 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 ATPAF1Q5TC12 328 aaPredicted RBP12.72□□□□□ -0.37
VARS-219ENST00000461328 FDX2Q6P4F2 183 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 ACP7Q6ZNF0 438 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 ZNF788Q6ZQV5 615 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 ANGPTL5Q86XS5 388 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 COMMD4Q9H0A8 199 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 ISG20L2Q9H9L3 353 aaKnown RBP12.72□□□□□ -0.37
VARS-219ENST00000461328 ZMAT3Q9HA38 289 aaKnown RBP12.72□□□□□ -0.37
VARS-219ENST00000461328 HHLA2Q9UM44 414 aa12.72□□□□□ -0.37
VARS-219ENST00000461328 SOX21Q9Y651 276 aaPredicted RBP12.72□□□□□ -0.37
VARS-219ENST00000461328 IGKV1D-17A0A075B6S4 117 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 A0A1W2PQ09 198 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 ERICH4A6NGS2 130 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 GPR37O15354 613 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 WBP4O75554 376 aaKnown RBP12.71□□□□□ -0.37
VARS-219ENST00000461328 ISG15P05161 165 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 ACAA1P09110 424 aaPredicted RBP12.71□□□□□ -0.37
VARS-219ENST00000461328 CCDC159P0C7I6 412 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 MYL12AP19105 171 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 AMY2BP19961 511 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 CFPP27918 469 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 TGM4P49221 684 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 FUT6P51993 359 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 MRPL28Q13084 256 aaKnown RBP12.71□□□□□ -0.37
VARS-219ENST00000461328 OGFRL1Q5TC84 451 aaPredicted RBP12.71□□□□□ -0.37
VARS-219ENST00000461328 BRD3OSQ6XYD6 125 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 CMTM4Q8IZR5 234 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 C3orf56Q8N813 242 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 RNF166Q96A37 237 aaPredicted RBP12.71□□□□□ -0.37
VARS-219ENST00000461328 FGGYQ96C11 551 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms