RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 TEX36Q5VZQ5 186 aa11.71□□□□□ -0.53
HDLBP-229ENST00000460826 ZNF773Q6PK81 442 aa11.71□□□□□ -0.53
HDLBP-229ENST00000460826 LYPD2Q6UXB3 125 aa11.71□□□□□ -0.53
HDLBP-229ENST00000460826 FAM90A1Q86YD7 464 aa11.71□□□□□ -0.53
HDLBP-229ENST00000460826 ZNF573Q86YE8 665 aa11.71□□□□□ -0.53
HDLBP-229ENST00000460826 BATF2Q8N1L9 274 aa11.71□□□□□ -0.53
HDLBP-229ENST00000460826 SVOPQ8N4V2 548 aa11.71□□□□□ -0.53
HDLBP-229ENST00000460826 DNAAF1Q8NEP3 725 aa11.71□□□□□ -0.53
HDLBP-229ENST00000460826 OR5D14Q8NGL3 314 aa11.71□□□□□ -0.53
HDLBP-229ENST00000460826 UFD1Q92890 307 aa11.71□□□□□ -0.53
HDLBP-229ENST00000460826 RFT1Q96AA3 541 aa11.71□□□□□ -0.53
HDLBP-229ENST00000460826 C1orf159Q96HA4 380 aa11.71□□□□□ -0.53
HDLBP-229ENST00000460826 TMED9Q9BVK6 235 aa11.71□□□□□ -0.53
HDLBP-229ENST00000460826 PATZ1Q9HBE1 687 aaKnown RBP11.71□□□□□ -0.53
HDLBP-229ENST00000460826 FN1P02751 2386 aaKnown RBP11.7□□□□□ -0.54
HDLBP-229ENST00000460826 TRAV8-7A0A075B6U6 113 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 ZNF879B4DU55 563 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 F5H0A9 414 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-229ENST00000460826 TNFRSF13BO14836 293 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-229ENST00000460826 INMTO95050 263 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 FSTL3O95633 263 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 TFF1P04155 84 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 PGA5P0DJD9 388 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 CPEP16870 476 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 ZNF16P17020 682 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-229ENST00000460826 IGFBP3P17936 291 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-229ENST00000460826 RBP2P50120 134 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 ATP1B3P54709 279 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 MTCP1P56278 107 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 SEC61A1P61619 476 aaKnown RBP11.7□□□□□ -0.54
HDLBP-229ENST00000460826 GPR50Q13585 617 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 SSX1Q16384 188 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 UBE2UQ5VVX9 321 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 Q71RC1 249 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-229ENST00000460826 BIVMQ86UB2 503 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 MUC20Q8N307 709 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-229ENST00000460826 SPICQ8N5J4 248 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 SPSB1Q96BD6 273 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 MSI2Q96DH6 328 aaKnown RBP11.7□□□□□ -0.54
HDLBP-229ENST00000460826 DERL3Q96Q80 235 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 NKX3-1Q99801 234 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-229ENST00000460826 PKIBQ9C010 78 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 SNTG1Q9NSN8 517 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 LRCH1Q9Y2L9 728 aa11.7□□□□□ -0.54
HDLBP-229ENST00000460826 SF3B6Q9Y3B4 125 aaKnown RBP11.7□□□□□ -0.54
HDLBP-229ENST00000460826 MAGEA13PA6NCF6 341 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 F8VVB4 439 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 F8VWA3 439 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 SPRY1O43609 319 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-229ENST00000460826 ALX3O95076 343 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 GYPAP02724 150 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 RAB3AP20336 220 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 GLRA1P23415 457 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 POU3F4P49335 361 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 GZMKP49863 264 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 GP2P55259 537 aaKnown RBP11.69□□□□□ -0.54
HDLBP-229ENST00000460826 IL24Q13007 206 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 ACSM3Q53FZ2 586 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 ARMCX4Q5H9R4 360 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 FAM27D1Q5T7N8 215 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 CLEC9AQ6UXN8 241 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 UNQ9370/PRO34162Q6UXP9 181 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 LHFPL2Q6ZUX7 228 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 SLC25A26Q70HW3 274 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 LURAP1LQ8IV03 231 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 PHC2Q8IXK0 858 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 MS4A15Q8N5U1 240 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 POC1AQ8NBT0 407 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 OR5T2Q8NGG2 359 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 OR5D18Q8NGL1 313 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 ZNF671Q8TAW3 534 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 TMEM203Q969S6 136 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 SLAMF9Q96A28 289 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 NRIP2Q9BQI9 281 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 LPAR2Q9HBW0 351 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 NOX4Q9NPH5 578 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 MTCH1Q9NZJ7 389 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 CTSZQ9UBR2 303 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 PCDHB10Q9UN67 800 aa11.69□□□□□ -0.54
HDLBP-229ENST00000460826 SETD2Q9BYW2 2564 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-229ENST00000460826 TRAV38-1A0A0B4J264 116 aa11.68□□□□□ -0.54
HDLBP-229ENST00000460826 IGKV1-12A0A0C4DH73 117 aa11.68□□□□□ -0.54
HDLBP-229ENST00000460826 A0A1B0GW55 424 aa11.68□□□□□ -0.54
HDLBP-229ENST00000460826 CD5LO43866 347 aa11.68□□□□□ -0.54
HDLBP-229ENST00000460826 NOS1APO75052 506 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-229ENST00000460826 FCN3O75636 299 aa11.68□□□□□ -0.54
HDLBP-229ENST00000460826 GPX5O75715 221 aa11.68□□□□□ -0.54
HDLBP-229ENST00000460826 SC5DO75845 299 aa11.68□□□□□ -0.54
HDLBP-229ENST00000460826 IGKV1D-12P01611 117 aa11.68□□□□□ -0.54
HDLBP-229ENST00000460826 HCKP08631 526 aa11.68□□□□□ -0.54
HDLBP-229ENST00000460826 WNT2P09544 360 aa11.68□□□□□ -0.54
HDLBP-229ENST00000460826 OCMP0CE72 109 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-229ENST00000460826 DUX4L2P0CJ85 424 aa11.68□□□□□ -0.54
HDLBP-229ENST00000460826 DUX4L3P0CJ86 424 aa11.68□□□□□ -0.54
HDLBP-229ENST00000460826 DUX4L4P0CJ87 422 aa11.68□□□□□ -0.54
HDLBP-229ENST00000460826 DUX4L5P0CJ88 424 aa11.68□□□□□ -0.54
HDLBP-229ENST00000460826 DUX4L6P0CJ89 424 aa11.68□□□□□ -0.54
HDLBP-229ENST00000460826 DUX4L7P0CJ90 424 aa11.68□□□□□ -0.54
HDLBP-229ENST00000460826 RPS2P15880 293 aaKnown RBP11.68□□□□□ -0.54
HDLBP-229ENST00000460826 FSTP19883 344 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms