RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 C10orf35Q96D05 121 aa10.65□□□□□ -0.7
CPNE6-202ENST00000460657 PLEKHF2Q9H8W4 249 aa10.65□□□□□ -0.7
CPNE6-202ENST00000460657 FAM166BA8MTA8 275 aa10.65□□□□□ -0.7
CPNE6-202ENST00000460657 ZNF32P17041 273 aa10.65□□□□□ -0.7
CPNE6-202ENST00000460657 SHEQ5VZ18 495 aa10.65□□□□□ -0.7
CPNE6-202ENST00000460657 RPL7L1Q6DKI1 246 aaKnown RBP10.65□□□□□ -0.7
CPNE6-202ENST00000460657 AQP3Q92482 292 aa10.65□□□□□ -0.7
CPNE6-202ENST00000460657 PRR13Q9NZ81 148 aa10.65□□□□□ -0.7
CPNE6-202ENST00000460657 TCF20Q9UGU0 1960 aaKnown RBP10.65□□□□□ -0.71
CPNE6-202ENST00000460657 A0A096LPE4 126 aa10.65□□□□□ -0.71
CPNE6-202ENST00000460657 A0A1W2PPZ6 126 aa10.65□□□□□ -0.71
CPNE6-202ENST00000460657 DEGS1O15121 323 aa10.65□□□□□ -0.71
CPNE6-202ENST00000460657 SSSCA1O60232 199 aa10.65□□□□□ -0.71
CPNE6-202ENST00000460657 LMX1BO60663 402 aa10.65□□□□□ -0.71
CPNE6-202ENST00000460657 IGHMP01871 453 aa10.65□□□□□ -0.71
CPNE6-202ENST00000460657 TAGLN2P37802 199 aaKnown RBP10.65□□□□□ -0.71
CPNE6-202ENST00000460657 HAAOP46952 286 aa10.65□□□□□ -0.71
CPNE6-202ENST00000460657 VAX1Q5SQQ9 334 aa10.65□□□□□ -0.71
CPNE6-202ENST00000460657 ZDHHC23Q8IYP9 409 aa10.65□□□□□ -0.71
CPNE6-202ENST00000460657 NAA60Q9H7X0 242 aa10.65□□□□□ -0.71
CPNE6-202ENST00000460657 FN3KRPQ9HA64 309 aa10.65□□□□□ -0.71
CPNE6-202ENST00000460657 G6PC2Q9NQR9 355 aa10.65□□□□□ -0.71
CPNE6-202ENST00000460657 FBXL17Q9UF56 701 aa10.65□□□□□ -0.71
CPNE6-202ENST00000460657 ANXA10Q9UJ72 324 aa10.65□□□□□ -0.71
CPNE6-202ENST00000460657 C17orf51A8MQB3 221 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 HS3ST1O14792 307 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 NXPH2O95156 264 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 DHODHQ02127 395 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 TRA2AQ13595 282 aaKnown RBP eCLIP10.64□□□□□ -0.71
CPNE6-202ENST00000460657 C20orf196Q8IYI0 205 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 MED9Q9NWA0 146 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 RCL1Q9Y2P8 373 aaKnown RBP10.64□□□□□ -0.71
CPNE6-202ENST00000460657 FAM96BQ9Y3D0 163 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 TMED3Q9Y3Q3 217 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 GPR31O00270 319 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 ARR3P36575 388 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 IDH3GP51553 393 aaPredicted RBP10.64□□□□□ -0.71
CPNE6-202ENST00000460657 EXTL1Q92935 676 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 AKR1E2Q96JD6 320 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 LPAR5Q9H1C0 372 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 RIMS4Q9H426 269 aaPredicted RBP10.64□□□□□ -0.71
CPNE6-202ENST00000460657 PIPOXQ9P0Z9 390 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 PURGQ9UJV8 347 aaKnown RBP10.64□□□□□ -0.71
CPNE6-202ENST00000460657 KLRC4-KLRK1H3BQV0 150 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 CD74P04233 296 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 DVL1P1P54792 670 aaPredicted RBP10.64□□□□□ -0.71
CPNE6-202ENST00000460657 WIPI1Q5MNZ9 446 aaPredicted RBP10.64□□□□□ -0.71
CPNE6-202ENST00000460657 HOGA1Q86XE5 327 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 ADPRHL1Q8NDY3 354 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 OR5T1Q8NG75 326 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 RDH5Q92781 318 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 UQCC1Q9NVA1 299 aa10.64□□□□□ -0.71
CPNE6-202ENST00000460657 ERVK-16P61578 105 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 RBMS3Q6XE24 437 aaKnown RBP10.63□□□□□ -0.71
CPNE6-202ENST00000460657 CEBPZOSA8MTT3 80 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 PRR32B1ATL7 298 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 PDCD6O75340 191 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 TUSC2O75896 110 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 CLDN1O95832 211 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 MIDNQ504T8 468 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 ZNF573Q86YE8 665 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 MRPS24Q96EL2 167 aaKnown RBP10.63□□□□□ -0.71
CPNE6-202ENST00000460657 FER1L6-AS2Q96M78 137 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 FAM206AQ9NX38 181 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 ARHGEF17Q96PE2 2063 aaPredicted RBP10.63□□□□□ -0.71
CPNE6-202ENST00000460657 ZNF724A8MTY0 619 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 EFSO43281 561 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 GLAP06280 429 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 SRD5A2P31213 254 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 RAC3P60763 192 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 RAB1AP62820 205 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 CLN3Q13286 438 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 CNEP1R1Q8N9A8 125 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 TMEM104Q8NE00 496 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 CHST5Q9GZS9 411 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 MAGT1Q9H0U3 335 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 PLK3Q9H4B4 646 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 LPAR3Q9UBY5 353 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 IGKV3D-11A0A0A0MRZ8 115 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 PRR19A6NJB7 356 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 NPIPB13A6NJU9 1138 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 NPIPB4C9JG80 1138 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 TMEM33P57088 247 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 NAAAQ02083 359 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 GUK1Q16774 197 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 EDEM2Q9BV94 578 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 C19orf12Q9NSK7 152 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 SLC39A9Q9NUM3 307 aa10.63□□□□□ -0.71
CPNE6-202ENST00000460657 OR2C1O95371 312 aa10.62□□□□□ -0.71
CPNE6-202ENST00000460657 OR5AC1P0C628 307 aa10.62□□□□□ -0.71
CPNE6-202ENST00000460657 STK11Q15831 433 aa10.62□□□□□ -0.71
CPNE6-202ENST00000460657 USF2Q15853 346 aaPredicted RBP10.62□□□□□ -0.71
CPNE6-202ENST00000460657 ZFP62Q8NB50 900 aaPredicted RBP10.62□□□□□ -0.71
CPNE6-202ENST00000460657 RTL8AQ9BWD3 113 aa10.62□□□□□ -0.71
CPNE6-202ENST00000460657 SF3B5Q9BWJ5 86 aaKnown RBP10.62□□□□□ -0.71
CPNE6-202ENST00000460657 C12orf49Q9H741 205 aa10.62□□□□□ -0.71
CPNE6-202ENST00000460657 LOXL2Q9Y4K0 774 aa10.62□□□□□ -0.71
CPNE6-202ENST00000460657 A0A1W2PR77 199 aa10.62□□□□□ -0.71
CPNE6-202ENST00000460657 MECP2P51608 486 aaKnown RBP10.62□□□□□ -0.71
CPNE6-202ENST00000460657 RPP30P78346 268 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms