RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 SYS1Q8N2H4 156 aa11.8□□□□□ -0.52
THBS3-204ENST00000460050 DHRSXQ8N5I4 330 aa11.8□□□□□ -0.52
THBS3-204ENST00000460050 POC1AQ8NBT0 407 aa11.8□□□□□ -0.52
THBS3-204ENST00000460050 C10orf35Q96D05 121 aa11.8□□□□□ -0.52
THBS3-204ENST00000460050 ZNF488Q96MN9 340 aa11.8□□□□□ -0.52
THBS3-204ENST00000460050 JMJD8Q96S16 334 aa11.8□□□□□ -0.52
THBS3-204ENST00000460050 MYCBPQ99417 103 aaPredicted RBP11.8□□□□□ -0.52
THBS3-204ENST00000460050 ZNF649Q9BS31 505 aa11.8□□□□□ -0.52
THBS3-204ENST00000460050 PCGF1Q9BSM1 259 aa11.8□□□□□ -0.52
THBS3-204ENST00000460050 CHST5Q9GZS9 411 aa11.8□□□□□ -0.52
THBS3-204ENST00000460050 MS4A7Q9GZW8 240 aaPredicted RBP11.8□□□□□ -0.52
THBS3-204ENST00000460050 INPP5EQ9NRR6 644 aa11.8□□□□□ -0.52
THBS3-204ENST00000460050 ERVK13-1Q9NX77 482 aa11.8□□□□□ -0.52
THBS3-204ENST00000460050 RPUSD1Q9UJJ7 312 aaKnown RBP11.8□□□□□ -0.52
THBS3-204ENST00000460050 SLC7A11Q9UPY5 501 aa11.8□□□□□ -0.52
THBS3-204ENST00000460050 ANK2Q01484 3957 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 IGKV1D-17A0A075B6S4 117 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 FAM230AA0A1W2PPH8 454 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 OR4C45A6NMZ5 311 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 ZNF879B4DU55 563 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 CASQ2O14958 399 aaPredicted RBP11.79□□□□□ -0.52
THBS3-204ENST00000460050 SIGLEC5O15389 551 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 PLATP00750 562 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 SERPINA3P01011 423 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 ISG15P05161 165 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 SFTPBP07988 381 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 ACAA1P09110 424 aaPredicted RBP11.79□□□□□ -0.52
THBS3-204ENST00000460050 PSG2P11465 335 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 MMP9P14780 707 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 MPZP25189 248 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 CCR9P51686 369 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 ALKBH1Q13686 389 aaKnown RBP11.79□□□□□ -0.52
THBS3-204ENST00000460050 DGUOKQ16854 277 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 TUSC1Q2TAM9 212 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 SMIM21Q3B7S5 101 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 TTC23Q5W5X9 447 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 ACP7Q6ZNF0 438 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 ANGPTL5Q86XS5 388 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 CALHM1Q8IU99 346 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 SIGLECL1Q8N7X8 197 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 CNIH3Q8TBE1 160 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 PP6455Q8WZ26 134 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 ADAT3Q96EY9 351 aaPredicted RBP11.79□□□□□ -0.52
THBS3-204ENST00000460050 MED30Q96HR3 178 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 WDFY2Q96P53 400 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 ISG20L2Q9H9L3 353 aaKnown RBP11.79□□□□□ -0.52
THBS3-204ENST00000460050 RASL12Q9NYN1 266 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 ZNF222Q9UK12 451 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 POLDIP2Q9Y2S7 368 aa11.79□□□□□ -0.52
THBS3-204ENST00000460050 GPR37O15354 613 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 NOS1APO75052 506 aaPredicted RBP11.78□□□□□ -0.52
THBS3-204ENST00000460050 TOX4O94842 621 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 NXPH2O95156 264 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 ZNF20P17024 532 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 FUT6P51993 359 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 ARF6P62330 175 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 ADARB1P78563 741 aaKnown RBP11.78□□□□□ -0.52
THBS3-204ENST00000460050 GABPB1Q06547 395 aaPredicted RBP11.78□□□□□ -0.52
THBS3-204ENST00000460050 OGFRL1Q5TC84 451 aaPredicted RBP11.78□□□□□ -0.52
THBS3-204ENST00000460050 METTL11BQ5VVY1 283 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 EGFL6Q8IUX8 553 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 BATF2Q8N1L9 274 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 ZNF676Q8N7Q3 588 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.78□□□□□ -0.52
THBS3-204ENST00000460050 LY6G5BQ8NDX9 201 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 SETD9Q8NE22 299 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 OR51A4Q8NGJ6 313 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 OR10AC1Q8NH08 325 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 ZFAND2BQ8WV99 257 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 H1FXQ92522 213 aaKnown RBP11.78□□□□□ -0.52
THBS3-204ENST00000460050 FGGYQ96C11 551 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 ZNF48Q96MX3 618 aaPredicted RBP11.78□□□□□ -0.52
THBS3-204ENST00000460050 TBX15Q96SF7 602 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 NRIP2Q9BQI9 281 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 DCTN5Q9BTE1 182 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 PKIBQ9C010 78 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 SIRPDQ9H106 197 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 FGF20Q9NP95 211 aaPredicted RBP11.78□□□□□ -0.52
THBS3-204ENST00000460050 ESM1Q9NQ30 184 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 SLC25A10Q9UBX3 287 aaPredicted RBP11.78□□□□□ -0.52
THBS3-204ENST00000460050 HHLA2Q9UM44 414 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 TENM1Q9UKZ4 2725 aa11.78□□□□□ -0.52
THBS3-204ENST00000460050 IGKV1-27A0A075B6S5 117 aa11.77□□□□□ -0.53
THBS3-204ENST00000460050 RFPL4AA6NLU0 287 aa11.77□□□□□ -0.53
THBS3-204ENST00000460050 E9PI62 339 aa11.77□□□□□ -0.53
THBS3-204ENST00000460050 RFPL4AL1F8VTS6 287 aa11.77□□□□□ -0.53
THBS3-204ENST00000460050 TRIM77I1YAP6 450 aa11.77□□□□□ -0.53
THBS3-204ENST00000460050 LIMS3P0CW19 117 aa11.77□□□□□ -0.53
THBS3-204ENST00000460050 LIMS4P0CW20 117 aa11.77□□□□□ -0.53
THBS3-204ENST00000460050 GBX2P52951 348 aaPredicted RBP11.77□□□□□ -0.53
THBS3-204ENST00000460050 CAV3P56539 151 aa11.77□□□□□ -0.53
THBS3-204ENST00000460050 IL24Q13007 206 aa11.77□□□□□ -0.53
THBS3-204ENST00000460050 MRPL28Q13084 256 aaKnown RBP11.77□□□□□ -0.53
THBS3-204ENST00000460050 CNN3Q15417 329 aaKnown RBP11.77□□□□□ -0.53
THBS3-204ENST00000460050 GPR157Q5UAW9 335 aa11.77□□□□□ -0.53
THBS3-204ENST00000460050 RBMS3Q6XE24 437 aaKnown RBP11.77□□□□□ -0.53
THBS3-204ENST00000460050 BRD3OSQ6XYD6 125 aa11.77□□□□□ -0.53
THBS3-204ENST00000460050 C9orf139Q6ZV77 190 aa11.77□□□□□ -0.53
THBS3-204ENST00000460050 ZDHHC22Q8N966 263 aa11.77□□□□□ -0.53
THBS3-204ENST00000460050 ZNRF1Q8ND25 227 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms