RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 SLITRK2Q9H156 845 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 VCX3AQ9NNX9 186 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 A0A1W2PPH5 198 aa8.96□□□□□ -0.97
UBR4-208ENST00000459947 TRAPPC2LH3BP13 241 aa8.96□□□□□ -0.97
UBR4-208ENST00000459947 ODF4Q2M2E3 257 aa8.96□□□□□ -0.97
UBR4-208ENST00000459947 CEP78Q5JTW2 689 aa8.96□□□□□ -0.97
UBR4-208ENST00000459947 WDR86Q86TI4 376 aa8.96□□□□□ -0.97
UBR4-208ENST00000459947 NKAIN3Q8N8D7 197 aa8.96□□□□□ -0.97
UBR4-208ENST00000459947 TBC1D15Q8TC07 691 aa8.96□□□□□ -0.97
UBR4-208ENST00000459947 GATAD2BQ8WXI9 593 aa8.96□□□□□ -0.97
UBR4-208ENST00000459947 RPL3LQ92901 407 aaKnown RBP8.96□□□□□ -0.97
UBR4-208ENST00000459947 DVL3Q92997 716 aaPredicted RBP8.96□□□□□ -0.97
UBR4-208ENST00000459947 SETXQ7Z333 2677 aaKnown RBP8.96□□□□□ -0.97
UBR4-208ENST00000459947 CCDC168Q8NDH2 2452 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 FBN2P35556 2912 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 ADAM20O43506 726 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 HCKP08631 526 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 HAAOP46952 286 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 KRTAP1-1Q07627 177 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 SPRNQ5BIV9 151 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 BOLLQ8N9W6 283 aaKnown RBP8.96□□□□□ -0.98
UBR4-208ENST00000459947 CEP19Q96LK0 163 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 CCDC90BQ9GZT6 254 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 FAM234AQ9H0X4 552 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 LRRC42Q9Y546 428 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 FAM230AA0A1W2PPH8 454 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 NXPH2O95156 264 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 IFNA2P01563 188 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 ANOS1P23352 680 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 MTCP1P56278 107 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 IL13RA1P78552 427 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 CHRFAM7AQ494W8 412 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 KCTD21Q4G0X4 260 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 PXT1Q8NFP0 134 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 FOXRED1Q96CU9 486 aaPredicted RBP8.96□□□□□ -0.98
UBR4-208ENST00000459947 TMEM138Q9NPI0 162 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 CLEC2DQ9UHP7 191 aa8.96□□□□□ -0.98
UBR4-208ENST00000459947 TRBV23-1A0A0A0MS06 115 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 GPR176Q14439 515 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 SPIN3Q5JUX0 258 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 DCAF12L2Q5VW00 463 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 GHSRQ92847 366 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 ADAT3Q96EY9 351 aaPredicted RBP8.95□□□□□ -0.98
UBR4-208ENST00000459947 POM121Q96HA1 1249 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 NARFLQ9H6Q4 476 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 FUOMA2VDF0 154 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 ZNF879B4DU55 563 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 BPIFB3P59826 476 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 TPBGQ13641 420 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 STUMQ69YW2 141 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 CMTM4Q8IZR5 234 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 NRIP2Q9BQI9 281 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 ZNF780AO75290 641 aaPredicted RBP8.95□□□□□ -0.98
UBR4-208ENST00000459947 BDKRB2P30411 391 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 UBE2V2Q15819 145 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 ACP7Q6ZNF0 438 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 OR13C9Q8NGT0 318 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 S100A13Q99584 98 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 PDCD1LG2Q9BQ51 273 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 BEX2Q9BXY8 128 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 POLQO75417 2590 aa8.95□□□□□ -0.98
UBR4-208ENST00000459947 MED13LQ71F56 2210 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 E9PI62 339 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 ARL6IP5O75915 188 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 CHRM2P08172 466 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 GALP22466 123 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 C21orf33P30042 268 aaPredicted RBP8.94□□□□□ -0.98
UBR4-208ENST00000459947 MTNR1BP49286 362 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 CAPZA1P52907 286 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 CAV3P56539 151 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 MED22Q15528 200 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 WDR25Q64LD2 544 aaPredicted RBP8.94□□□□□ -0.98
UBR4-208ENST00000459947 ZNF529Q6P280 563 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 ZNF826PQ6ZT77 177 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 ZNF561Q8N587 486 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 KIR3DL3Q8N743 410 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 SDSLQ96GA7 329 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 HES4Q9HCC6 221 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 HIF1ANQ9NWT6 349 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 LSM2Q9Y333 95 aaKnown RBP8.94□□□□□ -0.98
UBR4-208ENST00000459947 LOC105371242A0A075B767 164 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 TRBV5-7A0A0A0MS05 114 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 TNFRSF13BO14836 293 aaPredicted RBP8.94□□□□□ -0.98
UBR4-208ENST00000459947 SIGLEC5O15389 551 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 CELP19835 753 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 RDH10Q8IZV5 341 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 OR5D13Q8NGL4 314 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 TRMT10AQ8TBZ6 339 aaKnown RBP8.94□□□□□ -0.98
UBR4-208ENST00000459947 RAB40AQ8WXH6 277 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 TMEM106AQ96A25 262 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 GPER1Q99527 375 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 GHRLQ9UBU3 117 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 FAM157AC9JC47 383 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 CRLF1O75462 422 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 PSMD7P51665 324 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 ZNF788Q6ZQV5 615 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 C1QL2Q7Z5L3 287 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 LINC00596Q86U02 117 aa8.94□□□□□ -0.98
UBR4-208ENST00000459947 NUDT16L1Q9BRJ7 211 aaKnown RBP8.94□□□□□ -0.98
UBR4-208ENST00000459947 ACOT13Q9NPJ3 140 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms