RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 PQLC2LA1A4F0 135 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 MPZL2O60487 215 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 GATBO75879 557 aaKnown RBP13.39□□□□□ -0.27
CPSF6-203ENST00000456847 ACAA1P09110 424 aaPredicted RBP13.39□□□□□ -0.27
CPSF6-203ENST00000456847 PSG2P11465 335 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 CDONQ4KMG0 1287 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 ACP7Q6ZNF0 438 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 Q6ZSR3 168 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 VMO1Q7Z5L0 202 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 PDZD9Q8IXQ8 264 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 BATF2Q8N1L9 274 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 MRPL48Q96GC5 212 aaKnown RBP13.39□□□□□ -0.27
CPSF6-203ENST00000456847 C1orf147Q96MC9 270 aaPredicted RBP13.39□□□□□ -0.27
CPSF6-203ENST00000456847 IGKV1D-17A0A075B6S4 117 aa13.38□□□□□ -0.27
CPSF6-203ENST00000456847 E9PQ18 207 aa13.38□□□□□ -0.27
CPSF6-203ENST00000456847 NXPH2O95156 264 aa13.38□□□□□ -0.27
CPSF6-203ENST00000456847 HTR1AP08908 422 aa13.38□□□□□ -0.27
CPSF6-203ENST00000456847 KIR3DL2P43630 455 aa13.38□□□□□ -0.27
CPSF6-203ENST00000456847 ZNF91Q05481 1191 aa13.38□□□□□ -0.27
CPSF6-203ENST00000456847 ENTHD1Q8IYW4 607 aa13.38□□□□□ -0.27
CPSF6-203ENST00000456847 ACBD7Q8N6N7 88 aa13.38□□□□□ -0.27
CPSF6-203ENST00000456847 LY6G5BQ8NDX9 201 aa13.38□□□□□ -0.27
CPSF6-203ENST00000456847 Q96MT0 163 aa13.38□□□□□ -0.27
CPSF6-203ENST00000456847 ELL3Q9HB65 397 aaPredicted RBP13.38□□□□□ -0.27
CPSF6-203ENST00000456847 IGHV1-69DA0A0B4J2H0 117 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 J3QLW9 94 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 SLC16A6O15403 523 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 SERPINA3P01011 423 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 IGHV1-69P01742 117 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 PGA5P0DJD9 388 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 DBTP11182 482 aaKnown RBP13.37□□□□□ -0.27
CPSF6-203ENST00000456847 ZNF19P17023 458 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 CAV3P56539 151 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 ISL1P61371 349 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 ACTA2P62736 377 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 ACTG2P63267 376 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 SLC9A3R2Q15599 337 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 ZSCAN26Q16670 478 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 KCTD20Q7Z5Y7 419 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 KIR3DL3Q8N743 410 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 C3orf56Q8N813 242 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 ZNRF1Q8ND25 227 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 ZNF555Q8NEP9 628 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 OR2G2Q8NGZ5 317 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 LGALS12Q96DT0 336 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 SIRT7Q9NRC8 400 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 TNFRSF19Q9NS68 423 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 LOC100130705A0A1B0GUX0 176 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 HOXA3O43365 443 aaPredicted RBP13.37□□□□□ -0.27
CPSF6-203ENST00000456847 RNASE1P07998 156 aaKnown RBP13.37□□□□□ -0.27
CPSF6-203ENST00000456847 OR12D2P58182 307 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 CNN3Q15417 329 aaKnown RBP13.37□□□□□ -0.27
CPSF6-203ENST00000456847 TMEM244Q5VVB8 128 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 ANGPTL5Q86XS5 388 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 RDH10Q8IZV5 341 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 C8orf46Q8TAG6 207 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 C4orf36Q96KX1 117 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 MYCBPQ99417 103 aaPredicted RBP13.37□□□□□ -0.27
CPSF6-203ENST00000456847 CHST5Q9GZS9 411 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 OR14J1Q9UGF5 321 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 ZNF222Q9UK12 451 aa13.37□□□□□ -0.27
CPSF6-203ENST00000456847 EXOGQ9Y2C4 368 aaKnown RBP13.37□□□□□ -0.27
CPSF6-203ENST00000456847 RFPL4AA6NLU0 287 aa13.36□□□□□ -0.27
CPSF6-203ENST00000456847 RFPL4AL1F8VTS6 287 aa13.36□□□□□ -0.27
CPSF6-203ENST00000456847 J3QRE1 110 aa13.36□□□□□ -0.27
CPSF6-203ENST00000456847 SLC1A7O00341 560 aa13.36□□□□□ -0.27
CPSF6-203ENST00000456847 ZNF20P17024 532 aa13.36□□□□□ -0.27
CPSF6-203ENST00000456847 GABRB1P18505 474 aa13.36□□□□□ -0.27
CPSF6-203ENST00000456847 CFPP27918 469 aa13.36□□□□□ -0.27
CPSF6-203ENST00000456847 COMPP49747 757 aaPredicted RBP13.36□□□□□ -0.27
CPSF6-203ENST00000456847 CALHM1Q8IU99 346 aa13.36□□□□□ -0.27
CPSF6-203ENST00000456847 FAM185AQ8N0U4 392 aa13.36□□□□□ -0.27
CPSF6-203ENST00000456847 BORCS8Q96FH0 119 aa13.36□□□□□ -0.27
CPSF6-203ENST00000456847 DMRTB1Q96MA1 342 aa13.36□□□□□ -0.27
CPSF6-203ENST00000456847 ALG8Q9BVK2 526 aa13.36□□□□□ -0.27
CPSF6-203ENST00000456847 PKIBQ9C010 78 aa13.36□□□□□ -0.27
CPSF6-203ENST00000456847 FAM118AQ9NWS6 357 aa13.36□□□□□ -0.27
CPSF6-203ENST00000456847 MAB21L2Q9Y586 359 aa13.36□□□□□ -0.27
CPSF6-203ENST00000456847 CLDN34H7C241 214 aa13.35□□□□□ -0.27
CPSF6-203ENST00000456847 HKR1P10072 659 aa13.35□□□□□ -0.27
CPSF6-203ENST00000456847 CEBPDP49716 269 aaPredicted RBP13.35□□□□□ -0.27
CPSF6-203ENST00000456847 FUT6P51993 359 aa13.35□□□□□ -0.27
CPSF6-203ENST00000456847 BLMHQ13867 455 aa13.35□□□□□ -0.27
CPSF6-203ENST00000456847 UBE2V2Q15819 145 aa13.35□□□□□ -0.27
CPSF6-203ENST00000456847 AWAT1Q58HT5 328 aa13.35□□□□□ -0.27
CPSF6-203ENST00000456847 C10orf35Q96D05 121 aa13.35□□□□□ -0.27
CPSF6-203ENST00000456847 SDSLQ96GA7 329 aa13.35□□□□□ -0.27
CPSF6-203ENST00000456847 NRIP2Q9BQI9 281 aa13.35□□□□□ -0.27
CPSF6-203ENST00000456847 AMBNQ9NP70 447 aa13.35□□□□□ -0.27
CPSF6-203ENST00000456847 NOX4Q9NPH5 578 aa13.35□□□□□ -0.27
CPSF6-203ENST00000456847 SMPD3Q9NY59 655 aaPredicted RBP13.35□□□□□ -0.27
CPSF6-203ENST00000456847 NOS1APO75052 506 aaPredicted RBP13.35□□□□□ -0.27
CPSF6-203ENST00000456847 FADS2O95864 444 aaKnown RBP13.35□□□□□ -0.27
CPSF6-203ENST00000456847 OCM2P0CE71 109 aa13.35□□□□□ -0.27
CPSF6-203ENST00000456847 OCMP0CE72 109 aaPredicted RBP13.35□□□□□ -0.27
CPSF6-203ENST00000456847 MPZP25189 248 aa13.35□□□□□ -0.27
CPSF6-203ENST00000456847 FOXL1Q12952 345 aa13.35□□□□□ -0.27
CPSF6-203ENST00000456847 IL24Q13007 206 aa13.35□□□□□ -0.27
CPSF6-203ENST00000456847 LHFPL3Q86UP9 236 aa13.35□□□□□ -0.27
CPSF6-203ENST00000456847 ZNF561Q8N587 486 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms