RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 PRR35P0CG20 571 aa3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 HIST1H1DP16402 221 aaKnown RBP3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 CD96P40200 585 aa3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 CDC34P49427 236 aaPredicted RBP3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 NHLH1Q02575 133 aa3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 NHLH2Q02577 135 aa3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 RPL18Q07020 188 aaKnown RBP3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 SMN1Q16637 294 aaKnown RBP3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 C18orf21Q32NC0 220 aaPredicted RBP3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 OR1N1Q8NGS0 311 aa3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 OR2T10Q8NGZ9 312 aa3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 PCNPQ8WW12 178 aaKnown RBP3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 MRPL38Q96DV4 380 aaKnown RBP3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 MS4A10Q96PG2 267 aa3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 C1QTNF6Q9BXI9 259 aa3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 AUNIPQ9H7T9 357 aa3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 GNB4Q9HAV0 340 aa3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 PRNDQ9UKY0 176 aa3.62□□□□□ -1.83
PPP1R9A-208ENST00000456331 A0A1B0GTQ1 180 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 M0QYG6 137 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 GPR37O15354 613 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 FRS3O43559 492 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 HBZP02008 142 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 HOXB1P14653 301 aaPredicted RBP3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 ACP1P24666 158 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 PITX1P78337 314 aaPredicted RBP3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 TMEM65Q6PI78 240 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 PAQR6Q6TCH4 344 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 ZNF296Q8WUU4 475 aaPredicted RBP3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 TMED6Q8WW62 240 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 TPPP3Q9BW30 176 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 FBXO4Q9UKT5 387 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 TRAV17A0A0B4J275 112 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 SERTM2A0A1B0GWG4 89 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 MFSD2BA6NFX1 497 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 MKRN2OSH3BPM6 223 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 NUPL2O15504 423 aaKnown RBP3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 WDR1O75083 606 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 OR5AC1P0C628 307 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 NDUFB7P17568 137 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 RPL29P47914 159 aaKnown RBP3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 NTHL1P78549 312 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 HLA-DRB3P79483 266 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 FAM3AP98173 230 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 COL19A1Q14993 1142 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 MICBQ29980 383 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 GSG1Q2KHT4 349 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 CCDC144NLQ6NUI1 221 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 WDR74Q6RFH5 385 aaPredicted RBP3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 H1FOOQ8IZA3 346 aaPredicted RBP3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 UBAC2Q8NBM4 344 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 ZNF740Q8NDX6 193 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 KLHDC9Q8NEP7 349 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 OR1L3Q8NH93 324 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 NUDCD2Q8WVJ2 157 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 FBXW5Q969U6 566 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 OR2V2Q96R30 315 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 OR2A5Q96R48 311 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 NAA50Q9GZZ1 169 aaKnown RBP3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 MMP17Q9ULZ9 603 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 RPH3ALQ9UNE2 315 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 CACNA1EQ15878 2313 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 A0A0A6YYD5 115 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 ZNF716A6NP11 495 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 GAPDHP04406 335 aaKnown RBP3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 GUSBP08236 651 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 ORM2P19652 201 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 CCR2P41597 374 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 MEOX1P50221 254 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 SELENOTP62341 195 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 RPL11P62913 178 aaKnown RBP3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 LINC01559Q495D7 138 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 CA13Q8N1Q1 262 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 SLC16A11Q8NCK7 471 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 SLC25A40Q8TBP6 338 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 BADQ92934 168 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 HINT3Q9NQE9 182 aaKnown RBP3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 PIPOXQ9P0Z9 390 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 A0A1W2PPQ1 181 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 EPHA8P29322 1005 aaPredicted RBP3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 FCER1GP30273 86 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 ELLP55199 621 aaPredicted RBP3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 ZXDBP98169 803 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 HAGHQ16775 308 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 PRTGQ2VWP7 1150 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 DEFB110Q30KQ9 67 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 Q6ZN92 141 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 MEX3DQ86XN8 651 aaKnown RBP3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 PDPNQ86YL7 162 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 ZFP62Q8NB50 900 aaPredicted RBP3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 NUBPLQ8TB37 319 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 MAGT1Q9H0U3 335 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 TMEM9BQ9NQ34 198 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 NUP205Q92621 2012 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 MIA3Q5JRA6 1907 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 FAM90A26D6RGX4 464 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 PDCD6O75340 191 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 SCO1O75880 301 aa3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 RPLP1P05386 114 aaKnown RBP3.61□□□□□ -1.83
PPP1R9A-208ENST00000456331 FAM87AP0C7U9 286 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms