RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 TRBV4-1A0A0J9YWV2 114 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 CTXND1A0A1B0GTU2 59 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 PRSS37A4D1T9 235 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 HEPACAM2A8MVW5 462 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 A8MWL6 223 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 FCN1O00602 326 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 F2RP25116 425 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 TM4SF1P30408 202 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 DAPP51397 102 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 SNU13P55769 128 aaKnown RBP4.7□□□□□ -1.66
CSMD3-204ENST00000455883 KCNAB1Q14722 419 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 TWIST1Q15672 202 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 TMEM207Q6UWW9 146 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 DLEU7Q6UYE1 221 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 OR52N5Q8NH56 324 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 PRELID3AQ96N28 172 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 FYTTD1Q96QD9 318 aaKnown RBP4.7□□□□□ -1.66
CSMD3-204ENST00000455883 HES4Q9HCC6 221 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 CRYM-AS1A6NIL9 109 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 DCTN6O00399 190 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 SLC10A3P09131 477 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 MMP16P51512 607 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 LSM6P62312 80 aaKnown RBP4.7□□□□□ -1.66
CSMD3-204ENST00000455883 GLIPR1L1Q6UWM5 242 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 SLC36A1Q7Z2H8 476 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 C17orf78Q8N4C9 275 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 REEP6Q96HR9 211 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 PARD6AQ9NPB6 346 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 OR13C7P0DN81 318 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 C20orf196Q8IYI0 205 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 RNF175Q8N4F7 328 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 C19orf47Q8N9M1 422 aaKnown RBP4.7□□□□□ -1.66
CSMD3-204ENST00000455883 CHST14Q8NCH0 376 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 Q96M85 177 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 SGIP1Q9BQI5 828 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 TMEM9BQ9NQ34 198 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 MPC1Q9Y5U8 109 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 SERTM2A0A1B0GWG4 89 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 OR7C2O60412 319 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 HBZP02008 142 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 ACVRL1P37023 503 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 TP53I3Q53FA7 332 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 C9orf135Q5VTT2 229 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 ZNF551Q7Z340 670 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-204ENST00000455883 MDGA1Q8NFP4 955 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 ST3GAL6Q9Y274 331 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 RHBDD3Q9Y3P4 386 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 KCNE1BA0A087WTH5 132 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 FRG2CA6NGY1 282 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 KCNQ2O43526 872 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 ATXN1LP0C7T5 689 aaKnown RBP4.7□□□□□ -1.66
CSMD3-204ENST00000455883 ZNF888P0CJ79 500 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-204ENST00000455883 MGST1P10620 155 aaKnown RBP4.7□□□□□ -1.66
CSMD3-204ENST00000455883 CCR5P51681 352 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 PMVKQ15126 192 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 NCMAPQ5T1S8 102 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 Q6ZN92 141 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 LRP10Q7Z4F1 713 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 ZNF596Q8TC21 504 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 APIPQ96GX9 242 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 TMEM30AQ9NV96 361 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 TNFSF18Q9UNG2 199 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 CHD8Q9HCK8 2581 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 C7orf72A4D263 438 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 B4DGG1 531 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 PITX3O75364 302 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 OR10J4P0C629 311 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 HRH1P35367 487 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 MEF2BQ02080 365 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-204ENST00000455883 USP53Q70EK8 1073 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 TMED6Q8WW62 240 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 MGST2Q99735 147 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 SIRT3Q9NTG7 399 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-204ENST00000455883 SLAMF8Q9P0V8 285 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 A0A0G2JMZ2 1700 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 LRRC37A2A6NM11 1700 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 RBFOX3A6NFN3 312 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 CTSVO60911 334 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 DCAF12Q5T6F0 453 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 FAM71E1Q6IPT2 247 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 GPR32P1Q8NGA4 272 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 GGACTQ9BVM4 153 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 DOK5Q9P104 306 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 OPN4Q9UHM6 478 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 MRPS2Q9Y399 296 aaKnown RBP4.7□□□□□ -1.66
CSMD3-204ENST00000455883 A0A1B0GWA3 101 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 A0A1W2PRU2 124 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 GFYI3L273 518 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 CYB561P49447 251 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 UCP3P55916 312 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 S100A7L2Q5SY68 101 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 TGIF2LYQ8IUE0 185 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 OTOSQ8NHW6 89 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 FAM3CQ92520 227 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 OXGR1Q96P68 337 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 TGIF2Q9GZN2 237 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 PPM1DO15297 605 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 NDUFS6O75380 124 aaKnown RBP4.7□□□□□ -1.66
CSMD3-204ENST00000455883 ZNF8P17098 575 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-204ENST00000455883 TCF24Q7RTU0 167 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms