RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 H3BSH0 61 aa14.37□□□□□ -0.11
USP39-208ENST00000455732 HAX1O00165 279 aa14.37□□□□□ -0.11
USP39-208ENST00000455732 GPR37O15354 613 aa14.37□□□□□ -0.11
USP39-208ENST00000455732 SERPINA3P01011 423 aa14.37□□□□□ -0.11
USP39-208ENST00000455732 LIPFP07098 398 aa14.37□□□□□ -0.11
USP39-208ENST00000455732 ACAA1P09110 424 aaPredicted RBP14.37□□□□□ -0.11
USP39-208ENST00000455732 GNAO1P09471 354 aa14.37□□□□□ -0.11
USP39-208ENST00000455732 CCDC159P0C7I6 412 aa14.37□□□□□ -0.11
USP39-208ENST00000455732 PGA5P0DJD9 388 aa14.37□□□□□ -0.11
USP39-208ENST00000455732 TUSC1Q2TAM9 212 aa14.37□□□□□ -0.11
USP39-208ENST00000455732 ARMCX4Q5H9R4 360 aa14.37□□□□□ -0.11
USP39-208ENST00000455732 ZNF788Q6ZQV5 615 aa14.37□□□□□ -0.11
USP39-208ENST00000455732 C8orf59Q8N0T1 100 aaPredicted RBP14.37□□□□□ -0.11
USP39-208ENST00000455732 FAM216BQ8N7L0 139 aa14.37□□□□□ -0.11
USP39-208ENST00000455732 ZNF418Q8TF45 676 aaPredicted RBP14.37□□□□□ -0.11
USP39-208ENST00000455732 UPRTQ96BW1 309 aa14.37□□□□□ -0.11
USP39-208ENST00000455732 ADAT3Q96EY9 351 aaPredicted RBP14.37□□□□□ -0.11
USP39-208ENST00000455732 ZNF222Q9UK12 451 aa14.37□□□□□ -0.11
USP39-208ENST00000455732 DIMT1Q9UNQ2 313 aaKnown RBP14.37□□□□□ -0.11
USP39-208ENST00000455732 CAB39Q9Y376 341 aaPredicted RBP14.37□□□□□ -0.11
USP39-208ENST00000455732 A0A1B0GW55 424 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 TMEM212A6NML5 194 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 OR2AT4A6NND4 320 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 H0YJX3 145 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 SIGLEC5O15389 551 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 SYNGR1O43759 233 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 RGS9O75916 674 aaPredicted RBP14.36□□□□□ -0.11
USP39-208ENST00000455732 DUX4L2P0CJ85 424 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 DUX4L3P0CJ86 424 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 DUX4L4P0CJ87 422 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 DUX4L5P0CJ88 424 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 DUX4L6P0CJ89 424 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 DUX4L7P0CJ90 424 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 PIPP12273 146 aaPredicted RBP14.36□□□□□ -0.11
USP39-208ENST00000455732 FUT6P51993 359 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 GBX2P52951 348 aaPredicted RBP14.36□□□□□ -0.11
USP39-208ENST00000455732 HILS1P60008 231 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 GMFBP60983 142 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 IL24Q13007 206 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 CNN3Q15417 329 aaKnown RBP14.36□□□□□ -0.11
USP39-208ENST00000455732 SMIM21Q3B7S5 101 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 KLF17Q5JT82 389 aaPredicted RBP14.36□□□□□ -0.11
USP39-208ENST00000455732 DUX4L9Q6RFH8 374 aaPredicted RBP14.36□□□□□ -0.11
USP39-208ENST00000455732 ZNF676Q8N7Q3 588 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 PNLDC1Q8NA58 520 aaKnown RBP14.36□□□□□ -0.11
USP39-208ENST00000455732 DNAAF1Q8NEP3 725 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 ZFAND2BQ8WV99 257 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 TFAP2CQ92754 450 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 TMIGD2Q96BF3 282 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 DMRTB1Q96MA1 342 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 GAFA1Q96PS6 74 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 NRIP2Q9BQI9 281 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 RASSF4Q9H2L5 321 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 HES4Q9HCC6 221 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 SNTG1Q9NSN8 517 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 DUX4Q9UBX2 424 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 NUP50Q9UKX7 468 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 EXOSC1Q9Y3B2 195 aaKnown RBP14.36□□□□□ -0.11
USP39-208ENST00000455732 NBEAL1Q6ZS30 2694 aa14.36□□□□□ -0.11
USP39-208ENST00000455732 IGKV1D-17A0A075B6S4 117 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 E9PI62 339 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 NDUFB3O43676 98 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 ZFPL1O95159 310 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 PSG2P11465 335 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 ZNF20P17024 532 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 ETV1P50549 477 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 IL13RA1P78552 427 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 CCDC58Q4VC31 144 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 LRRC10Q5BKY1 277 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 ACP7Q6ZNF0 438 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 BTN2A1Q7KYR7 527 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 CALHM1Q8IU99 346 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 OR5T2Q8NGG2 359 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 OR51A4Q8NGJ6 313 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 OR10AC1Q8NH08 325 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 TRMT10AQ8TBZ6 339 aaKnown RBP14.35□□□□□ -0.11
USP39-208ENST00000455732 RPS4Y2Q8TD47 263 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 ST8SIA4Q92187 359 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 MED30Q96HR3 178 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 SLC6A7Q99884 636 aa14.35□□□□□ -0.11
USP39-208ENST00000455732 CNOT2Q9NZN8 540 aaKnown RBP14.35□□□□□ -0.11
USP39-208ENST00000455732 IGKV1-27A0A075B6S5 117 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 IGKV1-9A0A0C4DH69 117 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 FAM230AA0A1W2PPH8 454 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 ZNF879B4DU55 563 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 MT-ND2P03891 347 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 MYL12AP19105 171 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 PRKACBP22694 351 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 ERVK11-1P61568 191 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 LAIR2Q6ISS4 152 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 TMPRSS11AQ6ZMR5 421 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.34□□□□□ -0.11
USP39-208ENST00000455732 LY6G5BQ8NDX9 201 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 OR13C3Q8NGS6 347 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 OR5AK2Q8NH90 309 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 NPRL2Q8WTW4 380 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 NRG4Q8WWG1 115 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 C22orf15Q8WYQ4 148 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 SPSB1Q96BD6 273 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 FGGYQ96C11 551 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms