RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 CXorf67Q86X51 503 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 HOGA1Q86XE5 327 aa5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 FAM90A1Q86YD7 464 aa5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 LIX1LQ8IVB5 337 aa5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 TCTE3Q8IZS6 198 aa5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 OR2AE1Q8NHA4 323 aa5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 FAM216AQ8WUB2 273 aa5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 PIGCQ92535 297 aa5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 EXTL1Q92935 676 aa5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 NEDD4LQ96PU5 975 aa5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 PAPOLGQ9BWT3 736 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 PRORYQ9H606 182 aa5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 NOX3Q9HBY0 568 aa5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 GPR173Q9NS66 373 aa5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 ING3Q9NXR8 418 aa5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 NLKQ9UBE8 527 aa5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 SLC23A1Q9UHI7 598 aa5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 DMXL1Q9Y485 3027 aa5.88□□□□□ -1.47
ECHDC1-210ENST00000454859 TRBV6-6A0A0A6YYG2 114 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 ZNF503-AS2A6NEH8 195 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 TOXO94900 526 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 PTBP3O95758 552 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 GLRXP35754 106 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 CFHR2P36980 270 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 MDH2P40926 338 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 VEGFCP49767 419 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 TAS2R31P59538 309 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 RRAS2P62070 204 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 SLC22A6Q4U2R8 563 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 RNASE10Q5GAN6 216 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 C11orf88Q6PI97 169 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 GCNT2Q8N0V5 402 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 SPICQ8N5J4 248 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 CHST4Q8NCG5 386 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 NUP37Q8NFH4 326 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 OR8G5Q8NG78 346 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 SNAPC3Q92966 411 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 MARS2Q96GW9 593 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 DIRC2Q96SL1 478 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 TLNRD1Q9H1K6 362 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 ETAA1Q9NY74 926 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 RASL12Q9NYN1 266 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 GPR160Q9UJ42 338 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 URB1O60287 2271 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 C5orf63A6NC05 138 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 ZNF850A8MQ14 1090 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 TRAPPC2LH3BP13 241 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 PDCD6O75340 191 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 LYZL6O75951 148 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 CRYAAP02489 173 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 FCER2P06734 321 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 ZNF250P15622 560 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 SPINK2P20155 84 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 FUT3P21217 361 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 GIFP27352 417 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 KCNJ3P48549 501 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 RBM11P57052 281 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 SELENOVP59797 346 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 SEC61A1P61619 476 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 CXADRP78310 365 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 MRPS15P82914 257 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 FOXF2Q12947 444 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 RBM39Q14498 530 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 MPPED2Q15777 294 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 SPIN3Q5JUX0 258 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 C9orf135Q5VTT2 229 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 ZNF782Q6ZMW2 699 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 BIVMQ86UB2 503 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 FJX1Q86VR8 437 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 OR10Z1Q8NGY1 313 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 OR13G1Q8NGZ3 307 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 OR51F2Q8NH61 342 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 RND1Q92730 232 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 ERGIC1Q969X5 290 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 RADILQ96JH8 1075 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 DMRTA2Q96SC8 542 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 SOX7Q9BT81 388 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 PECRQ9BY49 303 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 SELENOIQ9C0D9 397 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 C20orf85Q9H1P6 137 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 CXXC4Q9H2H0 198 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 OR51I2Q9H344 312 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 GHITMQ9H3K2 345 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 TMEM100Q9NV29 134 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 RCC2Q9P258 522 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 KLK11Q9UBX7 282 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 GLS2Q9UI32 602 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 RAXQ9Y2V3 346 aa5.87□□□□□ -1.47
ECHDC1-210ENST00000454859 ACACAQ13085 2346 aa5.86□□□□□ -1.47
ECHDC1-210ENST00000454859 SPTBN4Q9H254 2564 aa5.86□□□□□ -1.47
ECHDC1-210ENST00000454859 IGHV2OR16-5A0A0B4J2B6 119 aa5.86□□□□□ -1.47
ECHDC1-210ENST00000454859 FAM230AA0A1W2PPH8 454 aa5.86□□□□□ -1.47
ECHDC1-210ENST00000454859 C16orf97H3BN30 126 aa5.86□□□□□ -1.47
ECHDC1-210ENST00000454859 ERVH48-1M5A8F1 160 aa5.86□□□□□ -1.47
ECHDC1-210ENST00000454859 CTXN2P0C2S0 81 aa5.86□□□□□ -1.47
ECHDC1-210ENST00000454859 CCNOP22674 350 aa5.86□□□□□ -1.47
ECHDC1-210ENST00000454859 PTAFRP25105 342 aa5.86□□□□□ -1.47
ECHDC1-210ENST00000454859 CHATP28329 748 aa5.86□□□□□ -1.47
ECHDC1-210ENST00000454859 BLVRBP30043 206 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-210ENST00000454859 GCH1P30793 250 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms